RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PTPROQ16827 1216 aa18.41■□□□□ 0.54
VMA21-202ENST00000370361 PFKFB3Q16875 520 aaPredicted RBP18.41■□□□□ 0.54
VMA21-202ENST00000370361 TCTN1Q2MV58 587 aa18.41■□□□□ 0.54
VMA21-202ENST00000370361 BLOC1S2Q6QNY1 142 aa18.41■□□□□ 0.54
VMA21-202ENST00000370361 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.41■□□□□ 0.548e-7■□□□□ 9.2
VMA21-202ENST00000370361 UHRF1Q96T88 793 aaPredicted RBP18.41■□□□□ 0.54
VMA21-202ENST00000370361 RWDD3Q9Y3V2 267 aa18.41■□□□□ 0.54
VMA21-202ENST00000370361 M0QZ92 97 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 RFXAPO00287 272 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 SCG2P13521 617 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 GNA11P29992 359 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 ZNF76P36508 570 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 SETQ01105 290 aaPredicted RBP18.4■□□□□ 0.54
VMA21-202ENST00000370361 IER5Q5VY09 327 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 TYW1BQ6NUM6 668 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 FBXO22Q8NEZ5 403 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 BICD2Q8TD16 824 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 HLA-CQ95604 372 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 TCEANC2Q96MN5 208 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 SUGCTQ9HAC7 445 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 AGO4Q9HCK5 861 aaKnown RBP18.4■□□□□ 0.54
VMA21-202ENST00000370361 C6orf50Q9HD87 102 aa18.4■□□□□ 0.54
VMA21-202ENST00000370361 FAM217BQ9NTX9 383 aaPredicted RBP18.4■□□□□ 0.54
VMA21-202ENST00000370361 ATG7O95352 703 aa18.39■□□□□ 0.53
VMA21-202ENST00000370361 CHRNA1P02708 482 aa18.39■□□□□ 0.53
VMA21-202ENST00000370361 CYP3A4P08684 503 aa18.39■□□□□ 0.53
VMA21-202ENST00000370361 MARK3P27448 753 aa18.39■□□□□ 0.53
VMA21-202ENST00000370361 STAT5BP51692 787 aa18.39■□□□□ 0.53
VMA21-202ENST00000370361 ACTR2P61160 394 aa18.39■□□□□ 0.53
VMA21-202ENST00000370361 AKAP17AQ02040 695 aaKnown RBP18.39■□□□□ 0.53
VMA21-202ENST00000370361 MGAT3Q09327 533 aa18.39■□□□□ 0.53
VMA21-202ENST00000370361 TMCO2Q7Z6W1 182 aaPredicted RBP18.39■□□□□ 0.53
VMA21-202ENST00000370361 JAKMIP1Q96N16 626 aaKnown RBP18.39■□□□□ 0.53
VMA21-202ENST00000370361 FTHL17Q9BXU8 183 aa18.39■□□□□ 0.53
VMA21-202ENST00000370361 AGXT2Q9BYV1 514 aa18.39■□□□□ 0.53
VMA21-202ENST00000370361 ZMYND12Q9H0C1 365 aa18.39■□□□□ 0.53
VMA21-202ENST00000370361 NAP1L2Q9ULW6 460 aaPredicted RBP18.39■□□□□ 0.53
VMA21-202ENST00000370361 NCOR1O75376 2440 aa18.39■□□□□ 0.53
VMA21-202ENST00000370361 PRPF3O43395 683 aaKnown RBP18.38■□□□□ 0.53
VMA21-202ENST00000370361 CDC27P30260 824 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 FAM160B1Q5W0V3 765 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 FAM117BQ6P1L5 589 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 TSHZ1Q6ZSZ6 1077 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 NME8Q8N427 588 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 CCDC148Q8NFR7 591 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 GDPD5Q8WTR4 605 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 RNF216Q9NWF9 866 aaPredicted RBP18.38■□□□□ 0.53
VMA21-202ENST00000370361 PKD2L1Q9P0L9 805 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 TCEAL9Q9UHQ7 104 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 TRPC6Q9Y210 931 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 TELO2Q9Y4R8 837 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 PCDHA2Q9Y5H9 948 aa18.38■□□□□ 0.53
VMA21-202ENST00000370361 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.37■□□□□ 0.53
VMA21-202ENST00000370361 CENPBP07199 599 aaPredicted RBP18.37■□□□□ 0.53
VMA21-202ENST00000370361 BMP1P13497 986 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 INSRRP14616 1297 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 RPS6KB1P23443 525 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 MRPS6P82932 125 aaKnown RBP18.37■□□□□ 0.53
VMA21-202ENST00000370361 TIGD5Q53EQ6 642 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 MARCH8Q5T0T0 291 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 RUFY4Q6ZNE9 571 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 Q6ZUG5 572 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 FAM177A1Q8N128 213 aaPredicted RBP18.37■□□□□ 0.53
VMA21-202ENST00000370361 REXO1Q8N1G1 1221 aaKnown RBP18.37■□□□□ 0.53
VMA21-202ENST00000370361 BRF1Q92994 677 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 RNF26Q9BY78 433 aaPredicted RBP18.37■□□□□ 0.53
VMA21-202ENST00000370361 TBC1D22BQ9NU19 505 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 SNX14Q9Y5W7 946 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 COL1A2P08123 1366 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 RALGAPA2Q2PPJ7 1873 aa18.37■□□□□ 0.53
VMA21-202ENST00000370361 IGKV6D-21A0A0A0MT36 114 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 SMIM35A0A1B0GVV1 85 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 POTEB3A0JP26 581 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 HBP1O60381 514 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 GHRP10912 638 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 ADD1P35611 737 aaKnown RBP18.36■□□□□ 0.53
VMA21-202ENST00000370361 EVCP57679 992 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 MUC3AQ02505 3323 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 LPIN1Q14693 890 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 FBXO47Q5MNV8 452 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 ODR4Q5SWX8 454 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 ERICH6BQ5W0A0 696 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 MIS18BP1Q6P0N0 1132 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 POTEBQ6S5H4 581 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 PLA2G4DQ86XP0 818 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 SMAP1Q8IYB5 467 aaPredicted RBP18.36■□□□□ 0.53
VMA21-202ENST00000370361 CYP2W1Q8TAV3 490 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 DNAJB3Q8WWF6 145 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 CRYGNQ8WXF5 182 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 MRPL38Q96DV4 380 aaKnown RBP18.36■□□□□ 0.53
VMA21-202ENST00000370361 IL17RAQ96F46 866 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 PCYT2Q99447 389 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 MTUS1Q9ULD2 1270 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 KDM3AQ9Y4C1 1321 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 CDY2AQ9Y6F7 541 aa18.36■□□□□ 0.53
VMA21-202ENST00000370361 H3BNC9 293 aa18.35■□□□□ 0.53
VMA21-202ENST00000370361 RB1P06400 928 aa18.35■□□□□ 0.53
VMA21-202ENST00000370361 ARP10275 920 aa18.35■□□□□ 0.53
VMA21-202ENST00000370361 APOBRQ0VD83 1088 aa18.35■□□□□ 0.53
VMA21-202ENST00000370361 ITGB3BPQ13352 177 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms