RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 YEATS4O95619 227 aa17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 MFSD10Q14728 455 aa17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 SWSAP1Q6NVH7 229 aa17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 CCDC60Q8IWA6 550 aaPredicted RBP17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 IGSF22Q8N9C0 903 aa17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 ERMNQ8TAM6 284 aa17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 NEK9Q8TD19 979 aa17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 ATP6V0A1Q93050 837 aa17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 PCYT2Q99447 389 aa17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 FTOQ9C0B1 505 aaKnown RBP eCLIP17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 MAFBQ9Y5Q3 323 aaPredicted RBP17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 IGSF9BQ9UPX0 1349 aa17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 EML1O00423 815 aa17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 PSEN2P49810 448 aa17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 KRT85P78386 507 aa17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 CEBPZQ03701 1054 aaKnown RBP17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 PTPN11Q06124 597 aaPredicted RBP17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 ITGA7Q13683 1181 aa17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 KIAA0753Q2KHM9 967 aa17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 NFRKBQ6P4R8 1299 aa17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 TRIM50Q86XT4 487 aa17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 LINC00301Q8NCQ3 95 aa17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 GABBR1Q9UBS5 961 aa17.46■□□□□ 0.39
PRPF38B-202ENST00000370022 POTEMA6NI47 508 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 P4HBP07237 508 aaKnown RBP17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 PSMC5P62195 406 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 DNM1Q05193 864 aaKnown RBP17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 SNX17Q15036 470 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 STK38Q15208 465 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 HAUS3Q68CZ6 603 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 PDXDC2PQ6P474 469 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 SLC39A5Q6ZMH5 540 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 SESTD1Q86VW0 696 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 SLC43A3Q8NBI5 491 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 AK8Q96MA6 479 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 TFIP11Q9UBB9 837 aaKnown RBP17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 LRWD1Q9UFC0 647 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 MYH15Q9Y2K3 1946 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 MROH7Q68CQ1 1323 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 VWA3AA6NCI4 1184 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 ARVCFO00192 962 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 PPP6R2O75170 966 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 PSMC6P62333 389 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 MLLT1Q03111 559 aaPredicted RBP17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 IL17AQ16552 155 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 NBPF20Q3BBV1 942 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 FOXD4L6Q3SYB3 417 aaPredicted RBP17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 FOXD4L3Q6VB84 417 aaPredicted RBP17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 C7orf31Q8N865 590 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 KCNG4Q8TDN1 519 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 FAM167AQ96KS9 214 aa17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 SRPRBQ9Y5M8 271 aaKnown RBP17.45■□□□□ 0.38
PRPF38B-202ENST00000370022 SPTLC2O15270 562 aa17.44■□□□□ 0.38
PRPF38B-202ENST00000370022 HSD17B14Q9BPX1 270 aa17.44■□□□□ 0.38
PRPF38B-202ENST00000370022 EIF2AK1Q9BQI3 630 aaKnown RBP17.44■□□□□ 0.38
PRPF38B-202ENST00000370022 HTATIP2Q9BUP3 242 aa17.44■□□□□ 0.38
PRPF38B-202ENST00000370022 TUFT1Q9NNX1 390 aa17.44■□□□□ 0.38
PRPF38B-202ENST00000370022 SCN10AQ9Y5Y9 1956 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 GRIN2DO15399 1336 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 MUTP22033 750 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 RGS19P49795 217 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 CDK7P50613 346 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 PLCB4Q15147 1175 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 KRT79Q5XKE5 535 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 CKAP2LQ8IYA6 745 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 KRI1Q8N9T8 703 aaKnown RBP17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 ATP8B4Q8TF62 1192 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 BBXQ8WY36 941 aaPredicted RBP17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 LXNQ9BS40 222 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 POLR3CQ9BUI4 534 aaPredicted RBP17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 SCAND2PQ9GZW5 306 aaPredicted RBP17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 RNPEPQ9H4A4 650 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 ZSWIM4Q9H7M6 989 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 FBXO2Q9UK22 296 aaPredicted RBP17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 NRCAMQ92823 1304 aa17.43■□□□□ 0.38
PRPF38B-202ENST00000370022 POTEB3A0JP26 581 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 SLC26A4O43511 780 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 HBP1O60381 514 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 SLITRK3O94933 977 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 GNAT1P11488 350 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 MARK3P27448 753 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 RPA1P27694 616 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 MARCKSP29966 332 aaPredicted RBP17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 ATN1P54259 1190 aaPredicted RBP17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 CHMP4BP1P59074 171 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 XKR3Q5GH77 459 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 POTEBQ6S5H4 581 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 ANKRD33Q7Z3H0 272 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 C4orf19Q8IY42 314 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 BANK1Q8NDB2 785 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 DYDC2Q96IM9 177 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 TOX2Q96NM4 488 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 NRBP2Q9NSY0 501 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 RCOR1Q9UKL0 485 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 TRPC6Q9Y210 931 aa17.42■□□□□ 0.38
PRPF38B-202ENST00000370022 RRN3P2A6NIE6 340 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 LYPLA2O95372 231 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 OATP04181 439 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms