RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 RBM12Q9NTZ6 932 aaKnown RBP16.7■□□□□ 0.26
PHTF1-202ENST00000369598 TPX2Q9ULW0 747 aaKnown RBP16.7■□□□□ 0.26
PHTF1-202ENST00000369598 COL2A1P02458 1487 aaPredicted RBP16.7■□□□□ 0.26
PHTF1-202ENST00000369598 ZNF233A6NK53 670 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 GOLGA8KD6RF30 607 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 GLI1P08151 1106 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 RRP1BQ14684 758 aaKnown RBP16.7■□□□□ 0.26
PHTF1-202ENST00000369598 SNCBQ16143 134 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 ARMC3Q5W041 872 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 C8orf74Q6P047 294 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 CYB5D1Q6P9G0 228 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 MYCBPAPQ8TBZ2 947 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 TCP11Q8WWU5 503 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 TRIM6Q9C030 488 aaPredicted RBP16.7■□□□□ 0.26
PHTF1-202ENST00000369598 TMEM39BQ9GZU3 492 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 BIN2Q9UBW5 565 aaPredicted RBP16.7■□□□□ 0.26
PHTF1-202ENST00000369598 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 JAG1P78504 1218 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 KIF5AQ12840 1032 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 MSL3Q8N5Y2 521 aaKnown RBP16.7■□□□□ 0.26
PHTF1-202ENST00000369598 NHEJ1Q9H9Q4 299 aaPredicted RBP16.7■□□□□ 0.26
PHTF1-202ENST00000369598 KIF9Q9HAQ2 790 aa16.7■□□□□ 0.26
PHTF1-202ENST00000369598 CNTNAP1P78357 1384 aa16.69■□□□□ 0.26
PHTF1-202ENST00000369598 PTGER2P43116 358 aa16.69■□□□□ 0.26
PHTF1-202ENST00000369598 NONOQ15233 471 aaKnown RBP eCLIP16.69■□□□□ 0.26
PHTF1-202ENST00000369598 FAM83AQ86UY5 434 aa16.69■□□□□ 0.26
PHTF1-202ENST00000369598 KLHL7Q8IXQ5 586 aa16.69■□□□□ 0.26
PHTF1-202ENST00000369598 REXO1Q8N1G1 1221 aaKnown RBP16.69■□□□□ 0.26
PHTF1-202ENST00000369598 GREB1LQ9C091 1923 aaPredicted RBP16.69■□□□□ 0.26
PHTF1-202ENST00000369598 ZBTB5O15062 677 aa16.69■□□□□ 0.26
PHTF1-202ENST00000369598 CLTAP09496 248 aa16.69■□□□□ 0.26
PHTF1-202ENST00000369598 MYO1EQ12965 1108 aa16.69■□□□□ 0.26
PHTF1-202ENST00000369598 PAK1Q13153 545 aa16.69■□□□□ 0.26
PHTF1-202ENST00000369598 MIGA2Q7L4E1 593 aa16.69■□□□□ 0.26
PHTF1-202ENST00000369598 PARP9Q8IXQ6 854 aa16.69■□□□□ 0.26
PHTF1-202ENST00000369598 FER1L6Q2WGJ9 1857 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 ESYT2A0FGR8 921 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 PHF20L1A8MW92 1017 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 PPP1R37O75864 691 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 PRCPP42785 496 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 ADCY7P51828 1080 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 RASSF7Q02833 373 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 KANK3Q6NY19 840 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 CREG2Q8IUH2 290 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 SPDL1Q96EA4 605 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 GJA3Q9Y6H8 435 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 EZRP15311 586 aaKnown RBP16.68■□□□□ 0.26
PHTF1-202ENST00000369598 IKQ13123 557 aaPredicted RBP16.68■□□□□ 0.26
PHTF1-202ENST00000369598 PREPLQ4J6C6 727 aaPredicted RBP16.68■□□□□ 0.26
PHTF1-202ENST00000369598 ARL6IP4Q66PJ3 421 aaKnown RBP16.68■□□□□ 0.26
PHTF1-202ENST00000369598 HIBCHQ6NVY1 386 aaPredicted RBP16.68■□□□□ 0.26
PHTF1-202ENST00000369598 TRIM47Q96LD4 638 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 EPN3Q9H201 632 aa16.68■□□□□ 0.26
PHTF1-202ENST00000369598 FAM207AQ9NSI2 230 aaPredicted RBP16.68■□□□□ 0.26
PHTF1-202ENST00000369598 FSBPO95073 299 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 GCFC2P16383 781 aaKnown RBP16.67■□□□□ 0.26
PHTF1-202ENST00000369598 RPS12P25398 132 aaKnown RBP16.67■□□□□ 0.26
PHTF1-202ENST00000369598 TNNI2P48788 182 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 TUBB4BP68371 445 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 LETM2Q2VYF4 491 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 DDX42Q86XP3 938 aaKnown RBP eCLIP16.67■□□□□ 0.26
PHTF1-202ENST00000369598 DNAAF5Q86Y56 855 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 EGFL6Q8IUX8 553 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 ELOA2Q8IYF1 753 aaPredicted RBP16.67■□□□□ 0.26
PHTF1-202ENST00000369598 ZBED3Q96IU2 234 aaPredicted RBP16.67■□□□□ 0.26
PHTF1-202ENST00000369598 VCPKMTQ9H867 229 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 MYO1AQ9UBC5 1043 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 PPP1R7Q15435 360 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 PTGISQ16647 500 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 NT5DC1Q5TFE4 455 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 PAPD7Q5XG87 772 aaKnown RBP16.67■□□□□ 0.26
PHTF1-202ENST00000369598 C4orf32Q8N8J7 132 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 GMCL1P1Q8NEA9 526 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 PLCD4Q9BRC7 762 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 OSBPL7Q9BZF2 842 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 SMIM23A6NLE4 172 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 CCNT1O60563 726 aaKnown RBP16.67■□□□□ 0.26
PHTF1-202ENST00000369598 SARNPP82979 210 aaKnown RBP16.67■□□□□ 0.26
PHTF1-202ENST00000369598 DTHD1Q6ZMT9 781 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 FUKQ8N0W3 1084 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 NLGN2Q8NFZ4 835 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 ZBTB10Q96DT7 871 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 STAMBPL1Q96FJ0 436 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 CCDC42Q96M95 316 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 ARHGEF10LQ9HCE6 1279 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 ZNHIT6Q9NWK9 470 aaKnown RBP16.67■□□□□ 0.26
PHTF1-202ENST00000369598 TMEM260Q9NX78 707 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 STIM2Q9P246 746 aa16.67■□□□□ 0.26
PHTF1-202ENST00000369598 HEXIM1O94992 359 aaKnown RBP16.66■□□□□ 0.26
PHTF1-202ENST00000369598 NDUFB10O96000 172 aa16.66■□□□□ 0.26
PHTF1-202ENST00000369598 ARID5AQ03989 594 aa16.66■□□□□ 0.26
PHTF1-202ENST00000369598 CDAN1Q8IWY9 1227 aa16.66■□□□□ 0.26
PHTF1-202ENST00000369598 TBCKQ8TEA7 893 aa16.66■□□□□ 0.26
PHTF1-202ENST00000369598 SCAF8Q9UPN6 1271 aaKnown RBP16.66■□□□□ 0.26
PHTF1-202ENST00000369598 BRCA1P38398 1863 aaKnown RBP16.66■□□□□ 0.26
PHTF1-202ENST00000369598 LTBP3Q9NS15 1303 aa16.66■□□□□ 0.26
PHTF1-202ENST00000369598 PP2D1A8MPX8 630 aa16.66■□□□□ 0.26
PHTF1-202ENST00000369598 ZNF263O14978 683 aa16.66■□□□□ 0.26
PHTF1-202ENST00000369598 TBC1D12O60347 775 aa16.66■□□□□ 0.26
PHTF1-202ENST00000369598 PPP1R11O60927 126 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms