RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 STXBP2Q15833 593 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 AAK1Q2M2I8 961 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 QRICH1Q2TAL8 776 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 BRAPQ7Z569 592 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 GAS2L3Q86XJ1 694 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 STAG2Q8N3U4 1231 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 SYAP1Q96A49 352 aaPredicted RBP11.33□□□□□ -0.6
TPM3-210ENST00000368530 RMDN3Q96TC7 470 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 EPHX3Q9H6B9 360 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 HDAC6Q9UBN7 1215 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 COG5Q9UP83 839 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 PTPRSQ13332 1948 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 TCF20Q9UGU0 1960 aaKnown RBP11.32□□□□□ -0.6
TPM3-210ENST00000368530 PPP1R11O60927 126 aaPredicted RBP11.32□□□□□ -0.6
TPM3-210ENST00000368530 F2P00734 622 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 MMP1P03956 469 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 NR3C2P08235 984 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 KIF5BP33176 963 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 GRM4Q14833 912 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 SAFBQ15424 915 aaKnown RBP eCLIP11.32□□□□□ -0.6
TPM3-210ENST00000368530 SKIV2LQ15477 1246 aaKnown RBP11.32□□□□□ -0.6
TPM3-210ENST00000368530 PKN1Q16512 942 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 MYSM1Q5VVJ2 828 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 LRRC8DQ7L1W4 858 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 BICD2Q8TD16 824 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.6
TPM3-210ENST00000368530 PGBD1Q96JS3 809 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 NOD1Q9Y239 953 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 PCDHB13Q9Y5F0 798 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 CLIC4Q9Y696 253 aa11.32□□□□□ -0.6
TPM3-210ENST00000368530 FSD2A1L4K1 749 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 BTBD18B2RXH4 712 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 EIF3JO75822 258 aaKnown RBP11.31□□□□□ -0.6
TPM3-210ENST00000368530 GJB5O95377 273 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 LIG1P18858 919 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 PSEN2P49810 448 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 HSD17B4P51659 736 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 CHMP4BP1P59074 171 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 ZNF200P98182 395 aaPredicted RBP11.31□□□□□ -0.6
TPM3-210ENST00000368530 STK38Q15208 465 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 DGKDQ16760 1214 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 SLC35G1Q2M3R5 365 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 ASPRV1Q53RT3 343 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 CCDC183Q5T5S1 534 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 ATL3Q6DD88 541 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 CNKSR3Q6P9H4 555 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 FBXO11Q86XK2 927 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 DIS3L2Q8IYB7 885 aaKnown RBP11.31□□□□□ -0.6
TPM3-210ENST00000368530 HLA-CQ95604 372 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 MTMR8Q96EF0 704 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 SUGCTQ9HAC7 445 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 PXMP2Q9NR77 195 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 LMCD1Q9NZU5 365 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 MAD2L2Q9UI95 211 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 RCOR1Q9UKL0 485 aa11.31□□□□□ -0.6
TPM3-210ENST00000368530 ABHD14A-ACY1A0A1B0GW23 586 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 PARNO95453 639 aaKnown RBP11.3□□□□□ -0.6
TPM3-210ENST00000368530 EIF2AK2P19525 551 aaKnown RBP11.3□□□□□ -0.6
TPM3-210ENST00000368530 KCNJ6P48051 423 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 ZNF445P59923 1031 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 ERVK-21P61565 698 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 SP2Q02086 613 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 PTK7Q13308 1070 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 LAMC2Q13753 1193 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 HSDL1Q3SXM5 330 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 L1TD1Q5T7N2 865 aaKnown RBP11.3□□□□□ -0.6
TPM3-210ENST00000368530 ZNF618Q5T7W0 954 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 CCDC155Q8N6L0 562 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 PPTC7Q8NI37 304 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 RAD9AQ99638 391 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 C1QTNF1Q9BXJ1 281 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 VAT1LQ9HCJ6 419 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 CD320Q9NPF0 282 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 C11orf16Q9NQ32 467 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 RTEL1Q9NZ71 1219 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 MRPL11Q9Y3B7 192 aaKnown RBP11.3□□□□□ -0.6
TPM3-210ENST00000368530 TRIP12Q14669 1992 aaPredicted RBP11.3□□□□□ -0.6
TPM3-210ENST00000368530 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.3□□□□□ -0.6
TPM3-210ENST00000368530 LINC01553A4QN01 128 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 PPFIA4O75335 1185 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 PARP1P09874 1014 aaKnown RBP11.3□□□□□ -0.6
TPM3-210ENST00000368530 ZNF286BP0CG31 522 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 SCG2P13521 617 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 XBP1P17861 261 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 U2AF2P26368 475 aaKnown RBP eCLIP11.3□□□□□ -0.65e-7■■■■□ 22.9
TPM3-210ENST00000368530 PLA2G5P39877 138 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 ME1P48163 572 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 NR5A1Q13285 461 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 MFSD10Q14728 455 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 SF3A1Q15459 793 aaKnown RBP11.3□□□□□ -0.6
TPM3-210ENST00000368530 KIAA0753Q2KHM9 967 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 ARHGEF16Q5VV41 709 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 VSIG10LQ86VR7 867 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 C7orf31Q8N865 590 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 GDPD5Q8WTR4 605 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 MAP3K14Q99558 947 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms