RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 HOXD13P35453 343 aa27.52■■■□□ 2
CLK2-203ENST00000368361 ADAM9Q13443 819 aa27.52■■■□□ 2
CLK2-203ENST00000368361 EPHA7Q15375 998 aa27.52■■■□□ 2
CLK2-203ENST00000368361 EDRF1Q3B7T1 1238 aa27.52■■■□□ 2
CLK2-203ENST00000368361 PPP4R3CPQ6ZMV5 832 aa27.52■■■□□ 2
CLK2-203ENST00000368361 C1orf186Q6ZWK4 172 aa27.52■■■□□ 2
CLK2-203ENST00000368361 ZC3H3Q8IXZ2 948 aaKnown RBP27.52■■■□□ 2
CLK2-203ENST00000368361 ATG4CQ96DT6 458 aa27.52■■■□□ 2
CLK2-203ENST00000368361 MMRN2Q9H8L6 949 aa27.52■■■□□ 2
CLK2-203ENST00000368361 AS3MTQ9HBK9 375 aa27.52■■■□□ 2
CLK2-203ENST00000368361 SFI1A8K8P3 1242 aa27.51■■□□□ 1.99
CLK2-203ENST00000368361 PRPF6O94906 941 aaKnown RBP27.51■■□□□ 1.99
CLK2-203ENST00000368361 MRPS9P82933 396 aaKnown RBP27.51■■□□□ 1.99
CLK2-203ENST00000368361 KNOP1Q1ED39 458 aaKnown RBP27.51■■□□□ 1.99
CLK2-203ENST00000368361 PCNX4Q63HM2 1172 aa27.51■■□□□ 1.99
CLK2-203ENST00000368361 ZNF397Q8NF99 534 aaPredicted RBP27.51■■□□□ 1.99
CLK2-203ENST00000368361 TAAR1Q96RJ0 339 aa27.51■■□□□ 1.99
CLK2-203ENST00000368361 KIF5CO60282 957 aa27.5■■□□□ 1.99
CLK2-203ENST00000368361 GNA14O95837 355 aa27.5■■□□□ 1.99
CLK2-203ENST00000368361 MUTP22033 750 aa27.5■■□□□ 1.99
CLK2-203ENST00000368361 MARSP56192 900 aaKnown RBP27.5■■□□□ 1.99
CLK2-203ENST00000368361 IQCDQ96DY2 449 aa27.5■■□□□ 1.99
CLK2-203ENST00000368361 LXNQ9BS40 222 aa27.5■■□□□ 1.99
CLK2-203ENST00000368361 ZNHIT6Q9NWK9 470 aaKnown RBP27.5■■□□□ 1.99
CLK2-203ENST00000368361 ZHX2Q9Y6X8 837 aa27.5■■□□□ 1.99
CLK2-203ENST00000368361 ARHGAP25P42331 645 aa27.5■■□□□ 1.99
CLK2-203ENST00000368361 MTERF4Q7Z6M4 381 aaKnown RBP27.5■■□□□ 1.99
CLK2-203ENST00000368361 BANK1Q8NDB2 785 aa27.5■■□□□ 1.99
CLK2-203ENST00000368361 TRERF1Q96PN7 1200 aa27.5■■□□□ 1.99
CLK2-203ENST00000368361 MAP3K20Q9NYL2 800 aaKnown RBP27.5■■□□□ 1.99
CLK2-203ENST00000368361 TRAF3IP3Q9Y228 551 aa27.5■■□□□ 1.99
CLK2-203ENST00000368361 EIF2AK2P19525 551 aaKnown RBP27.49■■□□□ 1.99
CLK2-203ENST00000368361 NR2F2P24468 414 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 EPS15P42566 896 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 HMGCS2P54868 508 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 TKFCQ3LXA3 575 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 TRIM59Q8IWR1 403 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 SMCR8Q8TEV9 937 aaPredicted RBP27.49■■□□□ 1.99
CLK2-203ENST00000368361 NACC1Q96RE7 527 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 MAP7D2Q96T17 732 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 UBIAD1Q9Y5Z9 338 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 FRMPD4Q14CM0 1322 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 GCNT3O95395 438 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 HIRAP54198 1017 aaPredicted RBP27.49■■□□□ 1.99
CLK2-203ENST00000368361 NIPA1Q7RTP0 329 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 OLFML3Q9NRN5 406 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 RIPK3Q9Y572 518 aa27.49■■□□□ 1.99
CLK2-203ENST00000368361 DHX15O43143 795 aaKnown RBP27.48■■□□□ 1.99
CLK2-203ENST00000368361 KCNMA1Q12791 1236 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 ARHGAP27Q6ZUM4 889 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 GPC2Q8N158 579 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 KLRG1Q96E93 195 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 PDCL3Q9H2J4 239 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 NHEJ1Q9H9Q4 299 aaPredicted RBP27.48■■□□□ 1.99
CLK2-203ENST00000368361 COL11A1P12107 1806 aaPredicted RBP27.48■■□□□ 1.99
CLK2-203ENST00000368361 PHIPQ8WWQ0 1821 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 CETN3O15182 167 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 FAM13AO94988 1023 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 MAP3K9P80192 1104 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 ITGB3BPQ13352 177 aaPredicted RBP27.48■■□□□ 1.99
CLK2-203ENST00000368361 PGM5Q15124 567 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 ELF2Q15723 593 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 BMT2Q1RMZ1 405 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 ZNF569Q5MCW4 686 aa27.48■■□□□ 1.99
CLK2-203ENST00000368361 PURBQ96QR8 312 aaKnown RBP27.48■■□□□ 1.99
CLK2-203ENST00000368361 AGO4Q9HCK5 861 aaKnown RBP27.48■■□□□ 1.99
CLK2-203ENST00000368361 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.48■■□□□ 1.99
CLK2-203ENST00000368361 RLFQ13129 1914 aa27.47■■□□□ 1.99
CLK2-203ENST00000368361 SSC5DA1L4H1 1573 aa27.47■■□□□ 1.99
CLK2-203ENST00000368361 FDX1P10109 184 aa27.47■■□□□ 1.99
CLK2-203ENST00000368361 GAP43P17677 238 aa27.47■■□□□ 1.99
CLK2-203ENST00000368361 KCNA1Q09470 495 aa27.47■■□□□ 1.99
CLK2-203ENST00000368361 NSMFQ6X4W1 530 aa27.47■■□□□ 1.99
CLK2-203ENST00000368361 RNF207Q6ZRF8 634 aa27.47■■□□□ 1.99
CLK2-203ENST00000368361 JADE2Q9NQC1 790 aa27.47■■□□□ 1.99
CLK2-203ENST00000368361 PLAGL2Q9UPG8 496 aa27.47■■□□□ 1.99
CLK2-203ENST00000368361 PDXKO00764 312 aa27.46■■□□□ 1.99
CLK2-203ENST00000368361 MTMR1Q13613 665 aa27.46■■□□□ 1.99
CLK2-203ENST00000368361 MIER3Q7Z3K6 550 aa27.46■■□□□ 1.99
CLK2-203ENST00000368361 MYCT1Q8N699 235 aa27.46■■□□□ 1.99
CLK2-203ENST00000368361 SAMD3Q8N6K7 520 aa27.46■■□□□ 1.99
CLK2-203ENST00000368361 MRFAP1Q9Y605 127 aa27.46■■□□□ 1.99
CLK2-203ENST00000368361 HERVK_113P62684 666 aa27.46■■□□□ 1.99
CLK2-203ENST00000368361 RMDN3Q96TC7 470 aa27.46■■□□□ 1.99
CLK2-203ENST00000368361 DICER1Q9UPY3 1922 aaKnown RBP27.45■■□□□ 1.99
CLK2-203ENST00000368361 ASTN1O14525 1302 aa27.45■■□□□ 1.99
CLK2-203ENST00000368361 LMNB1P20700 586 aa27.45■■□□□ 1.99
CLK2-203ENST00000368361 HNRNPH3P31942 346 aaKnown RBP27.45■■□□□ 1.99
CLK2-203ENST00000368361 CDK17Q00537 523 aa27.45■■□□□ 1.99
CLK2-203ENST00000368361 PDCL2Q8N4E4 241 aa27.45■■□□□ 1.99
CLK2-203ENST00000368361 C12orf42Q96LP6 360 aa27.45■■□□□ 1.99
CLK2-203ENST00000368361 CARD6Q9BX69 1037 aa27.45■■□□□ 1.99
CLK2-203ENST00000368361 PARVGQ9HBI0 331 aa27.45■■□□□ 1.99
CLK2-203ENST00000368361 RNF146Q9NTX7 359 aa27.45■■□□□ 1.99
CLK2-203ENST00000368361 TYW1Q9NV66 732 aaKnown RBP27.45■■□□□ 1.99
CLK2-203ENST00000368361 TRIM10Q9UDY6 481 aa27.45■■□□□ 1.99
CLK2-203ENST00000368361 PNMA2Q9UL42 364 aa27.45■■□□□ 1.99
CLK2-203ENST00000368361 CALUO43852 315 aaPredicted RBP27.45■■□□□ 1.98
CLK2-203ENST00000368361 MYCLP12524 364 aaPredicted RBP27.45■■□□□ 1.98
CLK2-203ENST00000368361 NMT1P30419 496 aaKnown RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms