RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 HDAC6Q9UBN7 1215 aa21.06■□□□□ 0.96
LMNA-204ENST00000368298 PCDHA12Q9UN75 941 aa21.06■□□□□ 0.96
LMNA-204ENST00000368298 PCDHB6Q9Y5E3 794 aa21.06■□□□□ 0.96
LMNA-204ENST00000368298 TLR3O15455 904 aaKnown RBP21.05■□□□□ 0.96
LMNA-204ENST00000368298 MARCH6O60337 910 aa21.05■□□□□ 0.96
LMNA-204ENST00000368298 B4GALT4O60513 344 aa21.05■□□□□ 0.96
LMNA-204ENST00000368298 CLTBP09497 229 aa21.05■□□□□ 0.96
LMNA-204ENST00000368298 FAM160B1Q5W0V3 765 aa21.05■□□□□ 0.96
LMNA-204ENST00000368298 SWSAP1Q6NVH7 229 aa21.05■□□□□ 0.96
LMNA-204ENST00000368298 ZNF302Q9NR11 478 aa21.05■□□□□ 0.96
LMNA-204ENST00000368298 PDLIM7Q9NR12 457 aa21.05■□□□□ 0.96
LMNA-204ENST00000368298 LAD1O00515 517 aa21.04■□□□□ 0.96
LMNA-204ENST00000368298 RESTQ13127 1097 aa21.04■□□□□ 0.96
LMNA-204ENST00000368298 MIER3Q7Z3K6 550 aa21.04■□□□□ 0.96
LMNA-204ENST00000368298 ZSCAN16Q9H4T2 348 aaPredicted RBP21.04■□□□□ 0.96
LMNA-204ENST00000368298 TTC12Q9H892 705 aaPredicted RBP21.04■□□□□ 0.96
LMNA-204ENST00000368298 SAMM50Q9Y512 469 aa21.04■□□□□ 0.96
LMNA-204ENST00000368298 MYH9P35579 1960 aaKnown RBP21.03■□□□□ 0.96
LMNA-204ENST00000368298 KIAA0355O15063 1070 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 OR52Z1P0C646 297 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 SMIM10L2AP0DMW4 78 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 SMIM10L2BP0DMW5 78 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 ADAM17P78536 824 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 FAM47CQ5HY64 1035 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 GDF6Q6KF10 455 aaPredicted RBP21.03■□□□□ 0.96
LMNA-204ENST00000368298 FERMT3Q86UX7 667 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 TNPO1Q92973 898 aaKnown RBP21.03■□□□□ 0.96
LMNA-204ENST00000368298 CTAGE1Q96RT6 745 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 TRPV6Q9H1D0 765 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 TBX21Q9UL17 535 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 NRCAMQ92823 1304 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 IGSF9BQ9UPX0 1349 aa21.03■□□□□ 0.96
LMNA-204ENST00000368298 EML1O00423 815 aa21.02■□□□□ 0.96
LMNA-204ENST00000368298 BACH1O14867 736 aa21.02■□□□□ 0.96
LMNA-204ENST00000368298 CHMP2AO43633 222 aa21.02■□□□□ 0.96
LMNA-204ENST00000368298 ATP4AP20648 1035 aa21.02■□□□□ 0.96
LMNA-204ENST00000368298 TXKP42681 527 aa21.02■□□□□ 0.96
LMNA-204ENST00000368298 CHMP4BP1P59074 171 aa21.02■□□□□ 0.96
LMNA-204ENST00000368298 PTGDRQ13258 359 aa21.02■□□□□ 0.96
LMNA-204ENST00000368298 PLCB4Q15147 1175 aa21.02■□□□□ 0.96
LMNA-204ENST00000368298 PDXDC2PQ6P474 469 aa21.02■□□□□ 0.96
LMNA-204ENST00000368298 PPP1R13LQ8WUF5 828 aa21.02■□□□□ 0.96
LMNA-204ENST00000368298 TRMT13Q9NUP7 481 aaKnown RBP21.02■□□□□ 0.96
LMNA-204ENST00000368298 TRIM43BA6NCK2 446 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 PRPHP41219 470 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 HIC1Q14526 733 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 EPHA7Q15375 998 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 PTGISQ16647 500 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 SH3RF1Q7Z6J0 888 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 TRIM43Q96BQ3 446 aaPredicted RBP21.01■□□□□ 0.95
LMNA-204ENST00000368298 TMEM39AQ9NV64 488 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 GABBR1Q9UBS5 961 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 POTEB3A0JP26 581 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 C17orf102A2RUQ5 167 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 GNAT1P11488 350 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 MARK3P27448 753 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 POTEBQ6S5H4 581 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 ATP8B4Q8TF62 1192 aa21.01■□□□□ 0.95
LMNA-204ENST00000368298 KAT6AQ92794 2004 aa21■□□□□ 0.95
LMNA-204ENST00000368298 ZNF862O60290 1169 aa21■□□□□ 0.95
LMNA-204ENST00000368298 HBP1O60381 514 aa21■□□□□ 0.95
LMNA-204ENST00000368298 P4HBP07237 508 aaKnown RBP21■□□□□ 0.95
LMNA-204ENST00000368298 FXR2P51116 673 aaKnown RBP eCLIP21■□□□□ 0.953e-7■■□□□ 12.4
LMNA-204ENST00000368298 ATP2C1P98194 919 aaPredicted RBP21■□□□□ 0.95
LMNA-204ENST00000368298 BBXQ8WY36 941 aaPredicted RBP21■□□□□ 0.95
LMNA-204ENST00000368298 ATP6V0A1Q93050 837 aa21■□□□□ 0.95
LMNA-204ENST00000368298 SETD4Q9NVD3 440 aa21■□□□□ 0.95
LMNA-204ENST00000368298 PRKAG2Q9UGJ0 569 aa21■□□□□ 0.95
LMNA-204ENST00000368298 TRIP12Q14669 1992 aaPredicted RBP20.99■□□□□ 0.95
LMNA-204ENST00000368298 MBLAC1A4D2B0 266 aaPredicted RBP20.99■□□□□ 0.95
LMNA-204ENST00000368298 RRN3P2A6NIE6 340 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 H0YGN5 161 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 BMP15O95972 392 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 INSRRP14616 1297 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 PSMC5P62195 406 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 RBL2Q08999 1139 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 PTK7Q13308 1070 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 PDIA5Q14554 519 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 UGCGQ16739 394 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 SERINC5Q86VE9 423 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 LMBR1Q8WVP7 490 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 FAM167AQ96KS9 214 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 HSD17B14Q9BPX1 270 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 PCDH10Q9P2E7 1040 aa20.99■□□□□ 0.95
LMNA-204ENST00000368298 COL1A2P08123 1366 aa20.98■□□□□ 0.95
LMNA-204ENST00000368298 LTBP2Q14767 1821 aa20.98■□□□□ 0.95
LMNA-204ENST00000368298 TIMP1P01033 207 aa20.98■□□□□ 0.95
LMNA-204ENST00000368298 ZSCAN22P10073 491 aaPredicted RBP20.98■□□□□ 0.95
LMNA-204ENST00000368298 QARSP47897 775 aaKnown RBP20.98■□□□□ 0.95
LMNA-204ENST00000368298 ZNF200P98182 395 aaPredicted RBP20.98■□□□□ 0.95
LMNA-204ENST00000368298 PPFIA1Q13136 1202 aa20.98■□□□□ 0.95
LMNA-204ENST00000368298 GRIK4Q16099 956 aa20.98■□□□□ 0.95
LMNA-204ENST00000368298 MARCH8Q5T0T0 291 aa20.98■□□□□ 0.95
LMNA-204ENST00000368298 ARL6IP4Q66PJ3 421 aaKnown RBP20.98■□□□□ 0.95
LMNA-204ENST00000368298 NCAPH2Q6IBW4 605 aa20.98■□□□□ 0.95
LMNA-204ENST00000368298 NOC4LQ9BVI4 516 aaKnown RBP20.98■□□□□ 0.95
LMNA-204ENST00000368298 ZMYND8Q9ULU4 1186 aaPredicted RBP20.98■□□□□ 0.95
LMNA-204ENST00000368298 TRPC6Q9Y210 931 aa20.98■□□□□ 0.95
LMNA-204ENST00000368298 PITPNM1O00562 1244 aa20.97■□□□□ 0.95
LMNA-204ENST00000368298 DKC1O60832 514 aaKnown RBP eCLIP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms