RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ETF1P62495 437 aaKnown RBP13.96□□□□□ -0.17
PTPRK-207ENST00000368226 TXNRD1Q16881 649 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 RWDD2AQ9UIY3 292 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 PRPF38AQ8NAV1 312 aaKnown RBP13.96□□□□□ -0.18
PTPRK-207ENST00000368226 SLC17A8Q8NDX2 589 aa13.96□□□□□ -0.18
PTPRK-207ENST00000368226 EPB41L5Q9HCM4 733 aa13.96□□□□□ -0.18
PTPRK-207ENST00000368226 BAIAP2L1Q9UHR4 511 aa13.96□□□□□ -0.18
PTPRK-207ENST00000368226 LRRD1A4D1F6 860 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 SPDYE2BA6NHP3 402 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 SPDYE6P0CI01 402 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 ANXA13P27216 316 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 SESN3P58005 492 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 RWDD4Q6NW29 188 aaKnown RBP13.95□□□□□ -0.18
PTPRK-207ENST00000368226 SUDS3Q9H7L9 328 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-207ENST00000368226 DCP1AQ9NPI6 582 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-207ENST00000368226 SLC16A4O15374 487 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 INHBAP08476 426 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 FOXD4Q12950 439 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-207ENST00000368226 ENAHQ8N8S7 591 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-207ENST00000368226 TYW1Q9NV66 732 aaKnown RBP13.95□□□□□ -0.18
PTPRK-207ENST00000368226 ATP8A1Q9Y2Q0 1164 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 TMED2Q15363 201 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 DCAF4Q8WV16 495 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 RASSF4Q9H2L5 321 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 CPSF3Q9UKF6 684 aaKnown RBP13.95□□□□□ -0.18
PTPRK-207ENST00000368226 NFIXQ14938 502 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 PNMA3Q9UL41 463 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 ZNF521Q96K83 1311 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 BAG2O95816 211 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 SLC7A5Q01650 507 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 JADE1Q6IE81 842 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 SFR1Q86XK3 245 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 RPGRIP1Q96KN7 1286 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 VCX3BQ9H321 246 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 MROH7-TTC4A0A0A0MT08 1334 aa13.95□□□□□ -0.18
PTPRK-207ENST00000368226 PP2D1A8MPX8 630 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 STXBP2Q15833 593 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 RHPN2Q8IUC4 686 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
PTPRK-207ENST00000368226 PDE11AQ9HCR9 933 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 CPP00450 1065 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 ARL4AP40617 200 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 LIFRP42702 1097 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 SCARF1Q14162 830 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 ARHGEF18Q6ZSZ5 1173 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 PPME1Q9Y570 386 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 POTEB3A0JP26 581 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 POTECB2RU33 542 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 MCF2LO15068 1137 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 CDC27P30260 824 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 IL1RL1Q01638 556 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 ZKSCAN8Q15776 578 aaPredicted RBP13.94□□□□□ -0.18
PTPRK-207ENST00000368226 TMTC4Q5T4D3 741 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 POTEBQ6S5H4 581 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 TDRD7Q8NHU6 1098 aaKnown RBP13.94□□□□□ -0.18
PTPRK-207ENST00000368226 GDAP1Q8TB36 358 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 RNF146Q9NTX7 359 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 MED7O43513 233 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 GARSP41250 739 aaKnown RBP13.94□□□□□ -0.18
PTPRK-207ENST00000368226 BRD3Q15059 726 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 PRAMEF18Q5VWM3 479 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 EXOC8Q8IYI6 725 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 CDKL2Q92772 493 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 ALKBH8Q96BT7 664 aaKnown RBP13.94□□□□□ -0.18
PTPRK-207ENST00000368226 KLHL14Q9P2G3 628 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 IPO11Q9UI26 975 aaKnown RBP13.94□□□□□ -0.18
PTPRK-207ENST00000368226 ANGPTL3Q9Y5C1 460 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 PRPSAP2O60256 369 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 SWSAP1Q6NVH7 229 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 RNF139Q8WU17 664 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 UTYO14607 1347 aa13.94□□□□□ -0.18
PTPRK-207ENST00000368226 HEXIM1O94992 359 aaKnown RBP13.93□□□□□ -0.18
PTPRK-207ENST00000368226 MUM1L1Q5H9M0 696 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 CYFIP1Q7L576 1253 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 ADGRF4Q8IZF3 695 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 MARCH10Q8NA82 808 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-207ENST00000368226 PRPF31Q8WWY3 499 aaKnown RBP13.93□□□□□ -0.18
PTPRK-207ENST00000368226 ATP6V1E2Q96A05 226 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 FAM213AQ9BRX8 229 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 IRAK4Q9NWZ3 460 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 RCOR1Q9UKL0 485 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 CCNE1P24864 410 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 RCN2Q14257 317 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 SMAD1Q15797 465 aaKnown RBP13.93□□□□□ -0.18
PTPRK-207ENST00000368226 TCP11X2Q5H9J9 407 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 C10orf76Q5T2E6 689 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 GANCQ8TET4 914 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 NDST4Q9H3R1 872 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 PCDHA13Q9Y5I0 950 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 WDR46O15213 610 aaKnown RBP13.93□□□□□ -0.18
PTPRK-207ENST00000368226 S100BP04271 92 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-207ENST00000368226 ELF1P32519 619 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 TWF2Q6IBS0 349 aaKnown RBP13.93□□□□□ -0.18
PTPRK-207ENST00000368226 HOMER3Q9NSC5 361 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 TNS3Q68CZ2 1445 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 POTEFA5A3E0 1075 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 POTEIP0CG38 1075 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 GCLMP48507 274 aa13.93□□□□□ -0.18
PTPRK-207ENST00000368226 RC3H1Q5TC82 1133 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms