RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 PFASO15067 1338 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 CACYBPQ9HB71 228 aaKnown RBP11.68□□□□□ -0.54
PTPRK-205ENST00000368213 JPH1Q9HDC5 661 aaPredicted RBP11.68□□□□□ -0.54
PTPRK-205ENST00000368213 IRAK4Q9NWZ3 460 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 ANAPC5Q9UJX4 755 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 STAT5BP51692 787 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 PSMC5P62195 406 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 VEPH1Q14D04 833 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 SMC6Q96SB8 1091 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 PSMB7Q99436 277 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 ARFGAP3Q9NP61 516 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 TMEM260Q9NX78 707 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 IPO11Q9UI26 975 aaKnown RBP11.68□□□□□ -0.54
PTPRK-205ENST00000368213 NDUFB10O96000 172 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 IVLP07476 585 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 LONRF2Q1L5Z9 754 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 CYB5R4Q7L1T6 521 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 POLR3FQ9H1D9 316 aaPredicted RBP11.68□□□□□ -0.54
PTPRK-205ENST00000368213 MAP3K20Q9NYL2 800 aaKnown RBP11.68□□□□□ -0.54
PTPRK-205ENST00000368213 FEZ2Q9UHY8 353 aaPredicted RBP11.68□□□□□ -0.54
PTPRK-205ENST00000368213 FAM184BQ9ULE4 1060 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 ORC4O43929 436 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 HEXIM1O94992 359 aaKnown RBP11.68□□□□□ -0.54
PTPRK-205ENST00000368213 ATXN8OSP0DMR3 200 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 SRGNP10124 158 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 PIN4Q9Y237 131 aaKnown RBP11.68□□□□□ -0.54
PTPRK-205ENST00000368213 H7C0C1 242 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 SLC4A1P02730 911 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 ATP5DP30049 168 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 RECQLP46063 649 aaPredicted RBP11.67□□□□□ -0.54
PTPRK-205ENST00000368213 ATP5OP48047 213 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 TUBB4BP68371 445 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 NOLC1Q14978 699 aaKnown RBP eCLIP11.67□□□□□ -0.543e-6■■■□□ 16.8
PTPRK-205ENST00000368213 IER5Q5VY09 327 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 ATG9AQ7Z3C6 839 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.67□□□□□ -0.54
PTPRK-205ENST00000368213 KLHL7Q8IXQ5 586 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 FBF1Q8TES7 1133 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 PNPLA7Q6ZV29 1317 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 BRD1O95696 1058 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 ARL4AP40617 200 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 CPT1AP50416 773 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 ALX1Q15699 326 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 KAZNQ674X7 775 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 CYFIP1Q7L576 1253 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 RFX6Q8HWS3 928 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 DHTKD1Q96HY7 919 aaPredicted RBP11.67□□□□□ -0.54
PTPRK-205ENST00000368213 NKIRAS1Q9NYS0 192 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 TSKSQ9UJT2 592 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 CSF1RP07333 972 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 CC2D1AQ6P1N0 951 aaPredicted RBP11.67□□□□□ -0.54
PTPRK-205ENST00000368213 P2RX5Q93086 422 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 TRIM11Q96F44 468 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 GSDMAQ96QA5 445 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 NYAP2Q9P242 653 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 ERICH4A6NGS2 130 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 DCDC2CA8MYV0 355 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 LRRN2O75325 713 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 CXCL9Q07325 125 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 CHST13Q8NET6 341 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 OR8K1Q8NGG5 319 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 TDRD7Q8NHU6 1098 aaKnown RBP11.67□□□□□ -0.54
PTPRK-205ENST00000368213 PRPF31Q8WWY3 499 aaKnown RBP11.67□□□□□ -0.54
PTPRK-205ENST00000368213 AIFM3Q96NN9 605 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 MTMR4Q9NYA4 1195 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 PCDHA10Q9Y5I2 948 aa11.67□□□□□ -0.54
PTPRK-205ENST00000368213 MYO3AQ8NEV4 1616 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 IGSF3O75054 1194 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 ZNF18P17022 549 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 NFKBIAP25963 317 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 GPC3P51654 580 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 EPHB1P54762 984 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 PLEKHH3Q7Z736 793 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 PCDHB6Q9Y5E3 794 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 COBLO75128 1261 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 MMP14P50281 582 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 HDLBPQ00341 1268 aaKnown RBP11.66□□□□□ -0.54
PTPRK-205ENST00000368213 RABL6Q3YEC7 729 aaPredicted RBP11.66□□□□□ -0.54
PTPRK-205ENST00000368213 TTBK2Q6IQ55 1244 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 PGBD4Q96DM1 585 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 MRPL4Q9BYD3 311 aaKnown RBP11.66□□□□□ -0.54
PTPRK-205ENST00000368213 SMARCAD1Q9H4L7 1026 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 MYO1FO00160 1098 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 GCLCP48506 637 aaPredicted RBP11.66□□□□□ -0.54
PTPRK-205ENST00000368213 FKBP3Q00688 224 aaKnown RBP11.66□□□□□ -0.54
PTPRK-205ENST00000368213 PSMD2Q13200 908 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 ARL13BQ3SXY8 428 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 SPATA1Q5VX52 437 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 CCNYQ8ND76 341 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 CCDC110Q8TBZ0 833 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 AFG1LQ8WV93 481 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 NCAPGQ9BPX3 1015 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 UBE2TQ9NPD8 197 aaPredicted RBP11.66□□□□□ -0.54
PTPRK-205ENST00000368213 FNDC3AQ9Y2H6 1198 aaKnown RBP11.66□□□□□ -0.54
PTPRK-205ENST00000368213 PPP2R3BQ9Y5P8 575 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 PLSCR1O15162 318 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 SLC16A4O15374 487 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 MYL1P05976 194 aa11.66□□□□□ -0.54
PTPRK-205ENST00000368213 H2AFZP0C0S5 128 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms