RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 NUP188Q5SRE5 1749 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 ZNF746Q6NUN9 644 aaPredicted RBP12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 GUF1Q8N442 669 aaKnown RBP12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 ZNF622Q969S3 477 aaKnown RBP eCLIP12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 PNMA5Q96PV4 448 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 CUEDC2Q9H467 287 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 STK38LQ9Y2H1 464 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 LAD1O00515 517 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 NAA25Q14CX7 972 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 CENPPQ6IPU0 288 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 FBXO33Q7Z6M2 555 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 GLYCTKQ8IVS8 523 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 LRRC45Q96CN5 670 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 NGLY1Q96IV0 654 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 ATP6V1G3Q96LB4 118 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 LRRC27Q9C0I9 530 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 BHMT2Q9H2M3 363 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 CTTNBP2NLQ9P2B4 639 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 NID2Q14112 1375 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 MEFVO15553 781 aaPredicted RBP12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 FAM13AO94988 1023 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 LRRC14Q15048 493 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 ZKSCAN8Q15776 578 aaPredicted RBP12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 SFR1Q86XK3 245 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 CACNA2D3Q8IZS8 1091 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 CCDC26Q8TAB7 109 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 CUL5Q93034 780 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 C8orf37Q96NL8 207 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 BCAS3Q9H6U6 928 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 SUFUQ9UMX1 484 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 PKD1L3Q7Z443 1732 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 GSTTP1A0A1W2PQM5 241 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 PPP1R12BO60237 982 aaPredicted RBP12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 FLOT1O75955 427 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 TNFAIP3P21580 790 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 MDH1P40925 334 aaKnown RBP12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 PPP1R2P41236 205 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 KCNMA1Q12791 1236 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 GLG1Q92896 1179 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 ELMO3Q96BJ8 720 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 ZMYND12Q9H0C1 365 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 PCIF1Q9H4Z3 704 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 SH3GLB2Q9NR46 395 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 GCNT4Q9P109 453 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 DNM3Q9UQ16 869 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 SIK3Q9Y2K2 1263 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 COL18A1P39060 1754 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 SKAP2O75563 359 aaPredicted RBP12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 MYL1P05976 194 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 LRRC63Q05C16 580 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 TRIP13Q15645 432 aaPredicted RBP12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 ECM1Q16610 540 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 HIBCHQ6NVY1 386 aaPredicted RBP12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 CAPN12Q6ZSI9 719 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 CNBD1Q8NA66 436 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 ADAM33Q9BZ11 813 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 TMX4Q9H1E5 349 aaPredicted RBP12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 HAUS2Q9NVX0 235 aa12.04□□□□□ -0.48
NECTIN4-201ENST00000368012 LAMB4A4D0S4 1761 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 RSPH10B2B2RC85 870 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 PGRMC1O00264 195 aaKnown RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 CFBP00751 764 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 RSPH10BP0C881 870 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 EPB41P11171 864 aaKnown RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 HSD17B3P37058 310 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 SNX1Q13596 522 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 IFI16Q16666 785 aaKnown RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 CEP72Q9P209 647 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 TSKSQ9UJT2 592 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 CCNL1Q9UK58 526 aaPredicted RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 AMFRQ9UKV5 643 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 NOC2LQ9Y3T9 749 aaKnown RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 TRIM49P0CI25 452 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 TRIM49CP0CI26 452 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 FLT3P36888 993 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 STAT1P42224 750 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 CASP4P49662 377 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 CTTNQ14247 550 aaKnown RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 MESDQ14696 234 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 SLC18A3Q16572 532 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 GALNT17Q6IS24 598 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 RUFY4Q6ZNE9 571 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 TEX2Q8IWB9 1127 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 ADGRF4Q8IZF3 695 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 N4BP2L2Q92802 583 aaPredicted RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 NYXQ9GZU5 481 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 TAF1DQ9H5J8 278 aaPredicted RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 USP40Q9NVE5 1235 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 RGL1Q9NZL6 768 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 TCEAL9Q9UHQ7 104 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 BAZ2AQ9UIF9 1905 aaKnown RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 ERVK-9P63128 1117 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 TBC1D1Q86TI0 1168 aaPredicted RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 MYCBPAPQ8TBZ2 947 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 ANKS1AQ92625 1134 aa12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 ELAC2Q9BQ52 826 aaKnown RBP12.03□□□□□ -0.48
NECTIN4-201ENST00000368012 TTYH3Q9C0H2 523 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms