RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 ZNF746Q6NUN9 644 aaPredicted RBP27.11■■□□□ 1.93
PFDN2-201ENST00000368010 TRAF7Q6Q0C0 670 aa27.11■■□□□ 1.93
PFDN2-201ENST00000368010 ABHD15Q6UXT9 468 aa27.11■■□□□ 1.93
PFDN2-201ENST00000368010 TRPC6Q9Y210 931 aa27.11■■□□□ 1.93
PFDN2-201ENST00000368010 IGKV6D-21A0A0A0MT36 114 aa27.1■■□□□ 1.93
PFDN2-201ENST00000368010 RSPH10B2B2RC85 870 aa27.1■■□□□ 1.93
PFDN2-201ENST00000368010 JAK2O60674 1132 aa27.1■■□□□ 1.93
PFDN2-201ENST00000368010 RSPH10BP0C881 870 aa27.1■■□□□ 1.93
PFDN2-201ENST00000368010 ST3GAL1Q11201 340 aa27.1■■□□□ 1.93
PFDN2-201ENST00000368010 GPNMBQ14956 572 aa27.1■■□□□ 1.93
PFDN2-201ENST00000368010 MOXD1Q6UVY6 613 aa27.1■■□□□ 1.93
PFDN2-201ENST00000368010 SMAP1Q8IYB5 467 aaPredicted RBP27.1■■□□□ 1.93
PFDN2-201ENST00000368010 BRMS1Q9HCU9 246 aa27.1■■□□□ 1.93
PFDN2-201ENST00000368010 TUBE1Q9UJT0 475 aa27.1■■□□□ 1.93
PFDN2-201ENST00000368010 TRIP12Q14669 1992 aaPredicted RBP27.09■■□□□ 1.93
PFDN2-201ENST00000368010 RRN3P2A6NIE6 340 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 GRXCR1A8MXD5 290 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 MSH4O15457 936 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 NBNO60934 754 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 TDP2O95551 362 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 CXCL10P02778 98 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 INSRRP14616 1297 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 DNAJB2P25686 324 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 PLCB4Q15147 1175 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 INF2Q27J81 1249 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 Q4G0T1 1027 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 TAF2Q6P1X5 1199 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 ZSCAN31Q96LW9 406 aaPredicted RBP27.09■■□□□ 1.93
PFDN2-201ENST00000368010 ZNF302Q9NR11 478 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 MTMR10Q9NXD2 777 aa27.09■■□□□ 1.93
PFDN2-201ENST00000368010 TMEM265A0A087WTH1 108 aa27.08■■□□□ 1.93
PFDN2-201ENST00000368010 CYP3A7-CYP3A51PA0A087WV96 503 aa27.08■■□□□ 1.93
PFDN2-201ENST00000368010 BAIAP3O94812 1187 aa27.08■■□□□ 1.93
PFDN2-201ENST00000368010 CYP3A7P24462 503 aa27.08■■□□□ 1.93
PFDN2-201ENST00000368010 IGBP1P78318 339 aa27.08■■□□□ 1.93
PFDN2-201ENST00000368010 RABEP1Q15276 862 aa27.08■■□□□ 1.93
PFDN2-201ENST00000368010 CNKSR3Q6P9H4 555 aa27.08■■□□□ 1.93
PFDN2-201ENST00000368010 CCDC60Q8IWA6 550 aaPredicted RBP27.08■■□□□ 1.93
PFDN2-201ENST00000368010 CCDC83Q8IWF9 413 aa27.08■■□□□ 1.93
PFDN2-201ENST00000368010 OXER1Q8TDS5 423 aa27.08■■□□□ 1.93
PFDN2-201ENST00000368010 RIT2Q99578 217 aa27.08■■□□□ 1.93
PFDN2-201ENST00000368010 PBX4Q9BYU1 374 aa27.08■■□□□ 1.93
PFDN2-201ENST00000368010 GAS7O60861 476 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 CTSHP09668 335 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 KRT2P35908 639 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 TRIM29Q14134 588 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 MBTPS1Q14703 1052 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 SWSAP1Q6NVH7 229 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 PDXDC2PQ6P474 469 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 SLC5A5Q92911 643 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 FAM161BQ96MY7 647 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 MBOAT7Q96N66 472 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 SH2B1Q9NRF2 756 aaPredicted RBP27.07■■□□□ 1.92
PFDN2-201ENST00000368010 SAMM50Q9Y512 469 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 PCDHA10Q9Y5I2 948 aa27.07■■□□□ 1.92
PFDN2-201ENST00000368010 POTEB3A0JP26 581 aa27.06■■□□□ 1.92
PFDN2-201ENST00000368010 MBLAC1A4D2B0 266 aaPredicted RBP27.06■■□□□ 1.92
PFDN2-201ENST00000368010 WDR64B1ANS9 1081 aa27.06■■□□□ 1.92
PFDN2-201ENST00000368010 PSAPP07602 524 aa27.06■■□□□ 1.92
PFDN2-201ENST00000368010 ATP2A2P16615 1042 aaKnown RBP27.06■■□□□ 1.92
PFDN2-201ENST00000368010 RAB30Q15771 203 aa27.06■■□□□ 1.92
PFDN2-201ENST00000368010 LETM2Q2VYF4 491 aa27.06■■□□□ 1.92
PFDN2-201ENST00000368010 LRCH2Q5VUJ6 765 aa27.06■■□□□ 1.92
PFDN2-201ENST00000368010 POTEBQ6S5H4 581 aa27.06■■□□□ 1.92
PFDN2-201ENST00000368010 PIK3AP1Q6ZUJ8 805 aa27.06■■□□□ 1.92
PFDN2-201ENST00000368010 NEK8Q86SG6 692 aa27.06■■□□□ 1.92
PFDN2-201ENST00000368010 TIFAQ96CG3 184 aa27.06■■□□□ 1.92
PFDN2-201ENST00000368010 LLPHQ9BRT6 129 aaKnown RBP27.06■■□□□ 1.92
PFDN2-201ENST00000368010 TEKT3Q9BXF9 490 aa27.06■■□□□ 1.92
PFDN2-201ENST00000368010 DDX25Q9UHL0 483 aaKnown RBP27.06■■□□□ 1.92
PFDN2-201ENST00000368010 PBX2P40425 430 aa27.05■■□□□ 1.92
PFDN2-201ENST00000368010 MARCH8Q5T0T0 291 aa27.05■■□□□ 1.92
PFDN2-201ENST00000368010 RUFY4Q6ZNE9 571 aa27.05■■□□□ 1.92
PFDN2-201ENST00000368010 RPAINQ86UA6 219 aa27.05■■□□□ 1.92
PFDN2-201ENST00000368010 RSPH3Q86UC2 560 aa27.05■■□□□ 1.92
PFDN2-201ENST00000368010 ATP8B4Q8TF62 1192 aa27.05■■□□□ 1.92
PFDN2-201ENST00000368010 SLC9A7Q96T83 725 aa27.05■■□□□ 1.92
PFDN2-201ENST00000368010 MSRAQ9UJ68 235 aa27.05■■□□□ 1.92
PFDN2-201ENST00000368010 HBP1O60381 514 aa27.04■■□□□ 1.92
PFDN2-201ENST00000368010 RPLP2P05387 115 aaKnown RBP27.04■■□□□ 1.92
PFDN2-201ENST00000368010 GCFC2P16383 781 aaKnown RBP27.04■■□□□ 1.92
PFDN2-201ENST00000368010 CKAP2LQ8IYA6 745 aa27.04■■□□□ 1.92
PFDN2-201ENST00000368010 NAP1L4Q99733 375 aaKnown RBP27.04■■□□□ 1.92
PFDN2-201ENST00000368010 TTYH1Q9H313 450 aaPredicted RBP27.04■■□□□ 1.92
PFDN2-201ENST00000368010 SEMA6BQ9H3T3 888 aa27.04■■□□□ 1.92
PFDN2-201ENST00000368010 CHMP2AO43633 222 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 ST18O60284 1047 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 MMP1P03956 469 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 SFNP31947 248 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 KCNJ6P48051 423 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 JAK3P52333 1124 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 FOSBP53539 338 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 NR5A1Q13285 461 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 FAM26DQ5JW98 314 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 PPP4R3AQ6IN85 833 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 PHOSPHO2Q8TCD6 241 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 DISC1Q9NRI5 854 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 GABBR1Q9UBS5 961 aa27.03■■□□□ 1.92
PFDN2-201ENST00000368010 MAFBQ9Y5Q3 323 aaPredicted RBP27.03■■□□□ 1.92
PFDN2-201ENST00000368010 COL1A2P08123 1366 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms