RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MLXIPQ9HAP2 919 aa17.1■□□□□ 0.33
VAMP4-202ENST00000367740 TOMM22Q9NS69 142 aa17.1■□□□□ 0.33
VAMP4-202ENST00000367740 ZBTB40Q9NUA8 1239 aa17.1■□□□□ 0.33
VAMP4-202ENST00000367740 NR2E1Q9Y466 385 aa17.1■□□□□ 0.33
VAMP4-202ENST00000367740 OTOGLQ3ZCN5 2332 aa17.09■□□□□ 0.33
VAMP4-202ENST00000367740 CFBP00751 764 aa17.09■□□□□ 0.33
VAMP4-202ENST00000367740 TECP42680 631 aa17.09■□□□□ 0.33
VAMP4-202ENST00000367740 GATMP50440 423 aa17.09■□□□□ 0.33
VAMP4-202ENST00000367740 HSD17B4P51659 736 aa17.09■□□□□ 0.33
VAMP4-202ENST00000367740 UBE3AQ05086 875 aa17.09■□□□□ 0.33
VAMP4-202ENST00000367740 ANGPT1Q15389 498 aa17.09■□□□□ 0.33
VAMP4-202ENST00000367740 NPAS4Q8IUM7 802 aa17.09■□□□□ 0.33
VAMP4-202ENST00000367740 MFSD1Q9H3U5 465 aa17.09■□□□□ 0.33
VAMP4-202ENST00000367740 BAHCC1Q9P281 2608 aa17.09■□□□□ 0.33
VAMP4-202ENST00000367740 MAP1BP46821 2468 aaKnown RBP17.08■□□□□ 0.33
VAMP4-202ENST00000367740 ASGR2P07307 311 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 SRGAP2BP0DMP2 458 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 TGFB3P10600 412 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 ERVFC1P60507 584 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 GHRHRQ02643 423 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 PGM5Q15124 567 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 QRICH1Q2TAL8 776 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 VPS53Q5VIR6 699 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 TSHZ1Q6ZSZ6 1077 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 RTN4RL1Q86UN2 441 aaPredicted RBP17.08■□□□□ 0.32
VAMP4-202ENST00000367740 VSIG10LQ86VR7 867 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 CCDC105Q8IYK2 499 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 ADGRF4Q8IZF3 695 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 ZFP91Q96JP5 570 aaPredicted RBP17.08■□□□□ 0.32
VAMP4-202ENST00000367740 USP26Q9BXU7 913 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 POMKQ9H5K3 350 aa17.08■□□□□ 0.32
VAMP4-202ENST00000367740 AGO3Q9H9G7 860 aaKnown RBP17.08■□□□□ 0.32
VAMP4-202ENST00000367740 MRPL11Q9Y3B7 192 aaKnown RBP17.08■□□□□ 0.32
VAMP4-202ENST00000367740 DENND4AQ7Z401 1863 aa17.07■□□□□ 0.32
VAMP4-202ENST00000367740 NOP56O00567 594 aaKnown RBP17.07■□□□□ 0.32
VAMP4-202ENST00000367740 FSCN2O14926 492 aa17.07■□□□□ 0.32
VAMP4-202ENST00000367740 PI15O43692 258 aa17.07■□□□□ 0.32
VAMP4-202ENST00000367740 LMNAP02545 664 aaKnown RBP17.07■□□□□ 0.32
VAMP4-202ENST00000367740 CD52P31358 61 aa17.07■□□□□ 0.32
VAMP4-202ENST00000367740 RASGRP4Q8TDF6 673 aa17.07■□□□□ 0.32
VAMP4-202ENST00000367740 GPATCH3Q96I76 525 aa17.07■□□□□ 0.32
VAMP4-202ENST00000367740 DLL3Q9NYJ7 618 aa17.07■□□□□ 0.32
VAMP4-202ENST00000367740 FANCMQ8IYD8 2048 aa17.07■□□□□ 0.32
VAMP4-202ENST00000367740 NRCAMQ92823 1304 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 ATXN8OSP0DMR3 200 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 AOC1P19801 751 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 LLGL2Q6P1M3 1020 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 TAF2Q6P1X5 1199 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 STOX1Q6ZVD7 989 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 FLCNQ8NFG4 579 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 KCNG4Q8TDN1 519 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 TTC14Q96N46 770 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 GPR20Q99678 358 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 ZNF215Q9UL58 517 aaPredicted RBP17.06■□□□□ 0.32
VAMP4-202ENST00000367740 TELO2Q9Y4R8 837 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 CDY2AQ9Y6F7 541 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 USP24Q9UPU5 2620 aa17.06■□□□□ 0.32
VAMP4-202ENST00000367740 FGF18O76093 207 aa17.05■□□□□ 0.32
VAMP4-202ENST00000367740 NPR3P17342 541 aa17.05■□□□□ 0.32
VAMP4-202ENST00000367740 SPTBN2O15020 2390 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 STAG3L1P0CL83 205 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 SCG2P13521 617 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 HOXB8P17481 243 aaPredicted RBP17.04■□□□□ 0.32
VAMP4-202ENST00000367740 PLPP4Q5VZY2 271 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 PDE12Q6L8Q7 609 aaKnown RBP17.04■□□□□ 0.32
VAMP4-202ENST00000367740 METTL7BQ6UX53 244 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 DTWD2Q8NBA8 298 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 DNAJB3Q8WWF6 145 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 FTHL17Q9BXU8 183 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 SEMA4AQ9H3S1 761 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 HCSTQ9UBK5 93 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 DDX19BQ9UMR2 479 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 PCDHB12Q9Y5F1 795 aa17.04■□□□□ 0.32
VAMP4-202ENST00000367740 CHD8Q9HCK8 2581 aa17.03■□□□□ 0.32
VAMP4-202ENST00000367740 CCND2P30279 289 aa17.03■□□□□ 0.32
VAMP4-202ENST00000367740 HOXA13P31271 388 aaPredicted RBP17.03■□□□□ 0.32
VAMP4-202ENST00000367740 APOBRQ0VD83 1088 aa17.03■□□□□ 0.32
VAMP4-202ENST00000367740 UTP14CQ5TAP6 766 aaKnown RBP17.03■□□□□ 0.32
VAMP4-202ENST00000367740 CYFIP1Q7L576 1253 aa17.03■□□□□ 0.32
VAMP4-202ENST00000367740 RSPH3Q86UC2 560 aa17.03■□□□□ 0.32
VAMP4-202ENST00000367740 NECTIN4Q96NY8 510 aa17.03■□□□□ 0.32
VAMP4-202ENST00000367740 JMJD4Q9H9V9 463 aa17.03■□□□□ 0.32
VAMP4-202ENST00000367740 TMEM260Q9NX78 707 aa17.03■□□□□ 0.32
VAMP4-202ENST00000367740 HIDE1A8MVS5 230 aa17.02■□□□□ 0.32
VAMP4-202ENST00000367740 MRPS6P82932 125 aaKnown RBP17.02■□□□□ 0.32
VAMP4-202ENST00000367740 SEMA3FQ13275 785 aa17.02■□□□□ 0.32
VAMP4-202ENST00000367740 ALX1Q15699 326 aa17.02■□□□□ 0.32
VAMP4-202ENST00000367740 ZDHHC14Q8IZN3 488 aa17.02■□□□□ 0.32
VAMP4-202ENST00000367740 ADAM7Q9H2U9 754 aa17.02■□□□□ 0.32
VAMP4-202ENST00000367740 TUBE1Q9UJT0 475 aa17.02■□□□□ 0.32
VAMP4-202ENST00000367740 R4GN57 208 aa17.02■□□□□ 0.32
VAMP4-202ENST00000367740 LAMA4Q16363 1823 aa17.01■□□□□ 0.31
VAMP4-202ENST00000367740 MBLAC1A4D2B0 266 aaPredicted RBP17.01■□□□□ 0.31
VAMP4-202ENST00000367740 SPOUT1Q5T280 376 aaKnown RBP17.01■□□□□ 0.31
VAMP4-202ENST00000367740 THNSL1Q8IYQ7 743 aa17.01■□□□□ 0.31
VAMP4-202ENST00000367740 TDRD5Q8NAT2 981 aaKnown RBP17.01■□□□□ 0.31
VAMP4-202ENST00000367740 COLGALT1Q8NBJ5 622 aa17.01■□□□□ 0.31
VAMP4-202ENST00000367740 PNMA1Q8ND90 353 aa17.01■□□□□ 0.31
VAMP4-202ENST00000367740 CYP2W1Q8TAV3 490 aa17.01■□□□□ 0.31
VAMP4-202ENST00000367740 PI4K2BQ8TCG2 481 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms