RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TRPA1O75762 1119 aa9.32□□□□□ -0.92
SYNE1-206ENST00000367253 TNNI1P19237 187 aa9.32□□□□□ -0.92
SYNE1-206ENST00000367253 DEFB132Q7Z7B7 95 aa9.32□□□□□ -0.92
SYNE1-206ENST00000367253 OOSP2Q86WS3 158 aa9.32□□□□□ -0.92
SYNE1-206ENST00000367253 BHMTQ93088 406 aa9.32□□□□□ -0.92
SYNE1-206ENST00000367253 PAWRQ96IZ0 340 aaKnown RBP9.32□□□□□ -0.92
SYNE1-206ENST00000367253 OSBPL9Q96SU4 736 aa9.32□□□□□ -0.92
SYNE1-206ENST00000367253 ENTPD7Q9NQZ7 604 aa9.32□□□□□ -0.92
SYNE1-206ENST00000367253 PLEKHG2Q9H7P9 1386 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.31□□□□□ -0.92
SYNE1-206ENST00000367253 KLF18A0A0U1RQI7 1052 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 SOCS7O14512 581 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 CHUKO15111 745 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 A1BGP04217 495 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 ITKQ08881 620 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 TSTA3Q13630 321 aaPredicted RBP9.31□□□□□ -0.92
SYNE1-206ENST00000367253 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.31□□□□□ -0.92
SYNE1-206ENST00000367253 BMP2KLQ5H9B9 411 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 GPRC5AQ8NFJ5 357 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 CSGALNACT1Q8TDX6 532 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 PPCSQ9HAB8 311 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 IFNKQ9P0W0 207 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 MAP3K19Q56UN5 1328 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 LRG1P02750 347 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 SEL1L2Q5TEA6 688 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 NCAPH2Q6IBW4 605 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 FAM47EQ6ZV65 393 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 JARID2Q92833 1246 aaPredicted RBP9.31□□□□□ -0.92
SYNE1-206ENST00000367253 ELP3Q9H9T3 547 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 PPME1Q9Y570 386 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 IKBKBO14920 756 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 AMHP03971 560 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 NOP14P78316 857 aaKnown RBP9.31□□□□□ -0.92
SYNE1-206ENST00000367253 MRPS15P82914 257 aaKnown RBP9.31□□□□□ -0.92
SYNE1-206ENST00000367253 PAK2Q13177 524 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 MTMR3Q13615 1198 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 ANKRD36BP1Q96IX9 119 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 FAM49AQ9H0Q0 323 aaPredicted RBP9.31□□□□□ -0.92
SYNE1-206ENST00000367253 MED4Q9NPJ6 270 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 LRRIQ4A6NIV6 560 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 ERVV-1B6SEH8 477 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 I3L4J1 428 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 GJC1P36383 396 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 NEK2P51955 445 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 EIF4A2Q14240 407 aaKnown RBP9.31□□□□□ -0.92
SYNE1-206ENST00000367253 STARD3Q14849 445 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 UAP1Q16222 522 aaPredicted RBP9.31□□□□□ -0.92
SYNE1-206ENST00000367253 LDHDQ86WU2 507 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 TDRD7Q8NHU6 1098 aaKnown RBP9.31□□□□□ -0.92
SYNE1-206ENST00000367253 TMX3Q96JJ7 454 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 HAUS8Q9BT25 410 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 NT5C3AQ9H0P0 336 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 HPCAL4Q9UM19 191 aa9.31□□□□□ -0.92
SYNE1-206ENST00000367253 CCNCP24863 283 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 MAPK4P31152 587 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 TNFAIP2Q03169 654 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 BFSP1Q12934 665 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 AOC3Q16853 763 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 Q4G0T1 1027 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 FSCBQ5H9T9 825 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 DCUN1D2Q6PH85 259 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 UHMK1Q8TAS1 419 aaKnown RBP9.3□□□□□ -0.92
SYNE1-206ENST00000367253 SH3TC2Q8TF17 1288 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 ITFG2Q969R8 447 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 GCOM2Q9BZD3 368 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-206ENST00000367253 BCL2L12Q9HB09 334 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 TRIM39Q9HCM9 518 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 KLHL14Q9P2G3 628 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 GON4LQ3T8J9 2241 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 TRAF5O00463 557 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 PDE6CP51160 858 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 EZH2Q15910 746 aaKnown RBP9.3□□□□□ -0.92
SYNE1-206ENST00000367253 FAM71BQ8TC56 605 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 PSPC1Q8WXF1 523 aaKnown RBP9.3□□□□□ -0.92
SYNE1-206ENST00000367253 LRRC4Q9HBW1 653 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 TUFT1Q9NNX1 390 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 STARD7Q9NQZ5 370 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 TUBA8Q9NY65 449 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-206ENST00000367253 TMEM110-MUSTN1A8MSY1 372 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 PSAPP07602 524 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 PCP11498 1178 aaKnown RBP9.3□□□□□ -0.92
SYNE1-206ENST00000367253 CPB1P15086 417 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 CPT1AP50416 773 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 CTSWP56202 376 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 DMP1Q13316 513 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-206ENST00000367253 PHKG1Q16816 387 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 BCORL1Q5H9F3 1711 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 SLFN12Q8IYM2 578 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 WDR60Q8WVS4 1066 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 CHMP6Q96FZ7 201 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 EYA1Q99502 592 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 GINM1Q9NU53 330 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 AFMP43652 599 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 AKR1D1P51857 326 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 TKFCQ3LXA3 575 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 GLB1LQ6UWU2 654 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 ATP11CQ8NB49 1132 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 UTP11Q9Y3A2 253 aaKnown RBP9.3□□□□□ -0.92
SYNE1-206ENST00000367253 PPP2R3BQ9Y5P8 575 aa9.3□□□□□ -0.92
SYNE1-206ENST00000367253 TECPR2O15040 1411 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms