RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 PPP1R18Q6NYC8 613 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 COA7Q96BR5 231 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 L3MBTL3Q96JM7 780 aaPredicted RBP16.19■□□□□ 0.18
PRKN-204ENST00000366896 NUDT12Q9BQG2 462 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 IFIH1Q9BYX4 1025 aaKnown RBP16.19■□□□□ 0.18
PRKN-204ENST00000366896 VEZTQ9HBM0 779 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 PCDHA13Q9Y5I0 950 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 SIPA1L1O43166 1804 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 COL2A1P02458 1487 aaPredicted RBP16.18■□□□□ 0.18
PRKN-204ENST00000366896 GLTPD2A6NH11 291 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 EMBQ6PCB8 327 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 B4GALNT4Q76KP1 1039 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 SH3BP5LQ7L8J4 393 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 GPATCH11Q8N954 259 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 NUCKS1Q9H1E3 243 aaKnown RBP16.18■□□□□ 0.18
PRKN-204ENST00000366896 CNTNAP1P78357 1384 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 ASTN2O75129 1339 aaPredicted RBP16.18■□□□□ 0.18
PRKN-204ENST00000366896 MOCS3O95396 460 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 EIF4A3P38919 411 aaKnown RBP16.18■□□□□ 0.18
PRKN-204ENST00000366896 KIF11P52732 1056 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 TMEM119Q4V9L6 283 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 KCNK18Q7Z418 384 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 TSEN2Q8NCE0 465 aaKnown RBP16.18■□□□□ 0.18
PRKN-204ENST00000366896 SPATA4Q8NEY3 305 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 SYN2Q92777 582 aaPredicted RBP16.18■□□□□ 0.18
PRKN-204ENST00000366896 ARL8AQ96BM9 186 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 SAMM50Q9Y512 469 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 MYH10P35580 1976 aa16.18■□□□□ 0.18
PRKN-204ENST00000366896 DDTLA6NHG4 134 aaPredicted RBP16.17■□□□□ 0.18
PRKN-204ENST00000366896 SLC26A4O43511 780 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 FNTAP49354 379 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 ASTE1Q2TB18 679 aaPredicted RBP16.17■□□□□ 0.18
PRKN-204ENST00000366896 ASPRV1Q53RT3 343 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 TTC19Q6DKK2 380 aaPredicted RBP16.17■□□□□ 0.18
PRKN-204ENST00000366896 PPP4R3AQ6IN85 833 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 LRRC55Q6ZSA7 311 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 CLEC10AQ8IUN9 316 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 RNF10Q8N5U6 811 aaKnown RBP16.17■□□□□ 0.18
PRKN-204ENST00000366896 RAD54LQ92698 747 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 CAVIN3Q969G5 261 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 ALS2CR12Q96Q35 445 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 DHX36Q9H2U1 1008 aaKnown RBP16.17■□□□□ 0.18
PRKN-204ENST00000366896 MMRN2Q9H8L6 949 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 ATRNL1Q5VV63 1379 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 LRRC53A6NM62 1247 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 RBAK-RBAKDNI3L0D1 243 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 CLSTN1O94985 981 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 SNHG28P0DPA3 235 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 PDHBP11177 359 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 TNFRSF8P28908 595 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 HIRAP54198 1017 aaPredicted RBP16.17■□□□□ 0.18
PRKN-204ENST00000366896 LRRC41Q15345 812 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 SPATS2Q86XZ4 545 aaKnown RBP16.17■□□□□ 0.18
PRKN-204ENST00000366896 LRRC47Q8N1G4 583 aaKnown RBP16.17■□□□□ 0.18
PRKN-204ENST00000366896 BAP1Q92560 729 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 SMARCAL1Q9NZC9 954 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 RNF14Q9UBS8 474 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 TSKSQ9UJT2 592 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 HYOU1Q9Y4L1 999 aa16.17■□□□□ 0.18
PRKN-204ENST00000366896 NDUFAB1O14561 156 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 MRPS25P82663 173 aaKnown RBP16.16■□□□□ 0.18
PRKN-204ENST00000366896 RRAGAQ7L523 313 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 FAM83AQ86UY5 434 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 TEX2Q8IWB9 1127 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 FAM151AQ8WW52 585 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 GJA10Q969M2 543 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 CDK5RAP3Q96JB5 506 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 ADARB2Q9NS39 739 aaKnown RBP16.16■□□□□ 0.18
PRKN-204ENST00000366896 HACL1Q9UJ83 578 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 HSF2BPO75031 334 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 FSBPO95073 299 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 HLA-DOAP06340 250 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 GABPAQ06546 454 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 RUFY1Q96T51 708 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 PSMB7Q99436 277 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 TSG101Q99816 390 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 EHD2Q9NZN4 543 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 STIM2Q9P246 746 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 CAPN7Q9Y6W3 813 aa16.16■□□□□ 0.18
PRKN-204ENST00000366896 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 ZEB2O60315 1214 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 CHRM1P11229 460 aaPredicted RBP16.15■□□□□ 0.18
PRKN-204ENST00000366896 ADCY7P51828 1080 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 PDCLQ13371 301 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 ECM1Q16610 540 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 KRT79Q5XKE5 535 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 HAUS3Q68CZ6 603 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 NFRKBQ6P4R8 1299 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 SNX29Q8TEQ0 813 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 PAGR1Q9BTK6 254 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 CXorf56Q9H5V9 222 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 SALL4Q9UJQ4 1053 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 WDR90Q96KV7 1748 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 MEFVO15553 781 aaPredicted RBP16.15■□□□□ 0.18
PRKN-204ENST00000366896 CXCR5P32302 372 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 MAP2K2P36507 400 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 SLC7A5Q01650 507 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 NNTQ13423 1086 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 UBE2SQ16763 222 aa16.15■□□□□ 0.18
PRKN-204ENST00000366896 ZCWPW2Q504Y3 356 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms