RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 CALM2P0DP24 149 aa13.83□□□□□ -0.19
VAMP1-201ENST00000361716 CALM3P0DP25 149 aa13.83□□□□□ -0.19
VAMP1-201ENST00000361716 KLRK1P26718 216 aa13.83□□□□□ -0.19
VAMP1-201ENST00000361716 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.19
VAMP1-201ENST00000361716 NBPF20Q3BBV1 942 aa13.83□□□□□ -0.19
VAMP1-201ENST00000361716 TTI2Q6NXR4 508 aa13.83□□□□□ -0.19
VAMP1-201ENST00000361716 USP17L2Q6R6M4 530 aa13.83□□□□□ -0.19
VAMP1-201ENST00000361716 DUSP9Q99956 384 aaKnown RBP13.83□□□□□ -0.19
VAMP1-201ENST00000361716 DDX23Q9BUQ8 820 aaKnown RBP13.83□□□□□ -0.19
VAMP1-201ENST00000361716 MTFR1LQ9H019 292 aa13.83□□□□□ -0.19
VAMP1-201ENST00000361716 PLAGL2Q9UPG8 496 aa13.83□□□□□ -0.19
VAMP1-201ENST00000361716 ABCC12Q96J65 1359 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 SCN11AQ9UI33 1791 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 KLHL33A6NCF5 533 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 SPDYE3A6NKU9 549 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 PYGLP06737 847 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 USP4Q13107 963 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 SFMBT2Q5VUG0 894 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 NUGGCQ68CJ6 796 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 LSM14BQ9BX40 385 aaKnown RBP13.83□□□□□ -0.2
VAMP1-201ENST00000361716 KDM4CQ9H3R0 1056 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 PNMA3Q9UL41 463 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 UTP11Q9Y3A2 253 aaKnown RBP13.83□□□□□ -0.2
VAMP1-201ENST00000361716 FRMPD2Q68DX3 1309 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-201ENST00000361716 DNAJC8O75937 253 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-201ENST00000361716 NQO1P15559 274 aaKnown RBP13.83□□□□□ -0.2
VAMP1-201ENST00000361716 PECAM1P16284 738 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-201ENST00000361716 HSPA9P38646 679 aaKnown RBP13.83□□□□□ -0.2
VAMP1-201ENST00000361716 IFI35P80217 286 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-201ENST00000361716 TGFBRAP1Q8WUH2 860 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 FGFR1OP2Q9NVK5 253 aa13.83□□□□□ -0.2
VAMP1-201ENST00000361716 DBR1Q9UK59 544 aaKnown RBP13.83□□□□□ -0.2
VAMP1-201ENST00000361716 SMCO2A6NFE2 343 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 PPIP5K2O43314 1243 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 CCNE1P24864 410 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 PAPOLAP51003 745 aaKnown RBP13.82□□□□□ -0.2
VAMP1-201ENST00000361716 ALX1Q15699 326 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 VWA3BQ502W6 1294 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 USP38Q8NB14 1042 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 FBF1Q8TES7 1133 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 PURBQ96QR8 312 aaKnown RBP13.82□□□□□ -0.2
VAMP1-201ENST00000361716 TRIM4Q9C037 500 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 NSRP1Q9H0G5 558 aaKnown RBP13.82□□□□□ -0.2
VAMP1-201ENST00000361716 PIDD1Q9HB75 910 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 ZFATQ9P243 1243 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 USP21Q9UK80 565 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 NHSL1Q5SYE7 1610 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 POTEMA6NI47 508 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 KRT16P08779 473 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 DCAF17Q5H9S7 520 aaPredicted RBP13.82□□□□□ -0.2
VAMP1-201ENST00000361716 SV2BQ7L1I2 683 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 TEKT4Q8WW24 435 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 GPCPD1Q9NPB8 672 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 TSKSQ9UJT2 592 aa13.82□□□□□ -0.2
VAMP1-201ENST00000361716 RAD23BP54727 409 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 DENND2CQ68D51 928 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 PEX26Q7Z412 305 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 LMNTD2Q8IXW0 634 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 TMEM260Q9NX78 707 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 SNX24Q9Y343 169 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 DPPA5A6NC42 116 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 SMNDC1O75940 238 aaKnown RBP eCLIP13.81□□□□□ -0.2
VAMP1-201ENST00000361716 ATP4AP20648 1035 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 LONP1P36776 959 aaKnown RBP13.81□□□□□ -0.2
VAMP1-201ENST00000361716 AMPD3Q01432 767 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 PICALMQ13492 652 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 MTMR3Q13615 1198 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 SEC23AQ15436 765 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 C11orf91Q3C1V1 193 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 SNX29Q8TEQ0 813 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 ISCUQ9H1K1 167 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 DNAJC17Q9NVM6 304 aaKnown RBP13.81□□□□□ -0.2
VAMP1-201ENST00000361716 ARPP21Q9UBL0 812 aaPredicted RBP13.81□□□□□ -0.2
VAMP1-201ENST00000361716 SPDYE5A6NIY4 337 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 PRLRP16471 622 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 LAMB3Q13751 1172 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.81□□□□□ -0.2
VAMP1-201ENST00000361716 ARMC9Q7Z3E5 817 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 VSIG1Q86XK7 387 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 MAB21L3Q8N8X9 362 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 GLIS3Q8NEA6 775 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 ETNK1Q9HBU6 452 aa13.81□□□□□ -0.2
VAMP1-201ENST00000361716 FOXO6A8MYZ6 492 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 TCP11X1B4DZS4 312 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 KLRF2D3W0D1 207 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 RPS6KA3P51812 740 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 MECOMQ03112 1051 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 IKQ13123 557 aaPredicted RBP13.8□□□□□ -0.2
VAMP1-201ENST00000361716 CCDC6Q16204 474 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 VGLL2Q8N8G2 317 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 COA7Q96BR5 231 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 FMO2Q99518 471 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 TSG101Q99816 390 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 PAGR1Q9BTK6 254 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 A0A087X0T9 212 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 A0A1B0GVG6 124 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 FAM228BP0C875 321 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 ZNF449Q6P9G9 518 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 HOOK3Q86VS8 718 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms