RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 MARCH8Q5T0T0 291 aa24.24■■□□□ 1.47
CD47-202ENST00000361309 NFXL1Q6ZNB6 911 aa24.24■■□□□ 1.47
CD47-202ENST00000361309 CLP1Q92989 425 aaKnown RBP24.24■■□□□ 1.47
CD47-202ENST00000361309 LMAN2LQ9H0V9 348 aa24.24■■□□□ 1.47
CD47-202ENST00000361309 CDY2AQ9Y6F7 541 aa24.24■■□□□ 1.47
CD47-202ENST00000361309 DCXO43602 365 aa24.23■■□□□ 1.47
CD47-202ENST00000361309 NCK2O43639 380 aa24.23■■□□□ 1.47
CD47-202ENST00000361309 RXRAP19793 462 aa24.23■■□□□ 1.47
CD47-202ENST00000361309 HYAL1Q12794 435 aa24.23■■□□□ 1.47
CD47-202ENST00000361309 MTMR1Q13613 665 aa24.23■■□□□ 1.47
CD47-202ENST00000361309 BTG3Q14201 252 aaPredicted RBP24.23■■□□□ 1.47
CD47-202ENST00000361309 UBE2SQ16763 222 aa24.23■■□□□ 1.47
CD47-202ENST00000361309 CTC1Q2NKJ3 1217 aa24.23■■□□□ 1.47
CD47-202ENST00000361309 ZNF689Q96CS4 500 aaPredicted RBP24.23■■□□□ 1.47
CD47-202ENST00000361309 ZBTB10Q96DT7 871 aa24.23■■□□□ 1.47
CD47-202ENST00000361309 SMARCAD1Q9H4L7 1026 aa24.23■■□□□ 1.47
CD47-202ENST00000361309 PRKAG3Q9UGI9 489 aa24.23■■□□□ 1.47
CD47-202ENST00000361309 UBIAD1Q9Y5Z9 338 aa24.23■■□□□ 1.47
CD47-202ENST00000361309 hCG_1642624A0A1W2PR95 340 aa24.22■■□□□ 1.47
CD47-202ENST00000361309 POTEB3A0JP26 581 aa24.22■■□□□ 1.47
CD47-202ENST00000361309 CCDC69A6NI79 296 aa24.22■■□□□ 1.47
CD47-202ENST00000361309 IGBP1P78318 339 aa24.22■■□□□ 1.47
CD47-202ENST00000361309 CLUL1Q15846 466 aa24.22■■□□□ 1.47
CD47-202ENST00000361309 CSPP1Q1MSJ5 1256 aa24.22■■□□□ 1.47
CD47-202ENST00000361309 POTEBQ6S5H4 581 aa24.22■■□□□ 1.47
CD47-202ENST00000361309 TSHZ1Q6ZSZ6 1077 aa24.22■■□□□ 1.47
CD47-202ENST00000361309 ADHFE1Q8IWW8 467 aa24.22■■□□□ 1.47
CD47-202ENST00000361309 MTA3Q9BTC8 594 aa24.22■■□□□ 1.47
CD47-202ENST00000361309 AGO3Q9H9G7 860 aaKnown RBP24.22■■□□□ 1.47
CD47-202ENST00000361309 C19orf67A6NJJ6 358 aa24.21■■□□□ 1.47
CD47-202ENST00000361309 SH2B2O14492 632 aaPredicted RBP24.21■■□□□ 1.47
CD47-202ENST00000361309 DGKIO75912 1065 aa24.21■■□□□ 1.47
CD47-202ENST00000361309 CSPG5O95196 566 aa24.21■■□□□ 1.47
CD47-202ENST00000361309 MRPS6P82932 125 aaKnown RBP24.21■■□□□ 1.47
CD47-202ENST00000361309 DLX2Q07687 328 aaPredicted RBP24.21■■□□□ 1.47
CD47-202ENST00000361309 TMTC2Q8N394 836 aa24.21■■□□□ 1.47
CD47-202ENST00000361309 LINC01599Q8WXQ3 324 aa24.21■■□□□ 1.47
CD47-202ENST00000361309 FAM49AQ9H0Q0 323 aaPredicted RBP24.21■■□□□ 1.47
CD47-202ENST00000361309 JADE2Q9NQC1 790 aa24.21■■□□□ 1.47
CD47-202ENST00000361309 EVPLQ92817 2033 aa24.2■■□□□ 1.47
CD47-202ENST00000361309 WDFY4Q6ZS81 3184 aa24.2■■□□□ 1.47
CD47-202ENST00000361309 SPDYE3A6NKU9 549 aa24.2■■□□□ 1.46
CD47-202ENST00000361309 INSRRP14616 1297 aa24.2■■□□□ 1.46
CD47-202ENST00000361309 CD52P31358 61 aa24.2■■□□□ 1.46
CD47-202ENST00000361309 MCM5P33992 734 aa24.2■■□□□ 1.46
CD47-202ENST00000361309 GTF2F1P35269 517 aaKnown RBP eCLIP24.2■■□□□ 1.46
CD47-202ENST00000361309 COL9A3Q14050 684 aaPredicted RBP24.2■■□□□ 1.46
CD47-202ENST00000361309 RAB11FIP4Q86YS3 637 aa24.2■■□□□ 1.46
CD47-202ENST00000361309 CCDC82Q8N4S0 544 aa24.2■■□□□ 1.46
CD47-202ENST00000361309 TMEM87BQ96K49 555 aa24.2■■□□□ 1.46
CD47-202ENST00000361309 PCYT2Q99447 389 aa24.2■■□□□ 1.46
CD47-202ENST00000361309 IGFLR1Q9H665 355 aa24.2■■□□□ 1.46
CD47-202ENST00000361309 ALG13Q9NP73 1137 aaKnown RBP24.2■■□□□ 1.46
CD47-202ENST00000361309 PCDHA6Q9UN73 950 aa24.2■■□□□ 1.46
CD47-202ENST00000361309 PCDHA8Q9Y5H6 950 aa24.2■■□□□ 1.46
CD47-202ENST00000361309 RRN3P2A6NIE6 340 aa24.19■■□□□ 1.46
CD47-202ENST00000361309 PLVAPQ9BX97 442 aa24.19■■□□□ 1.46
CD47-202ENST00000361309 PLXNA4Q9HCM2 1894 aa24.19■■□□□ 1.46
CD47-202ENST00000361309 MAFGO15525 162 aa24.18■■□□□ 1.46
CD47-202ENST00000361309 MBTPS2O43462 519 aa24.18■■□□□ 1.46
CD47-202ENST00000361309 MMP1P03956 469 aa24.18■■□□□ 1.46
CD47-202ENST00000361309 CALM1P0DP23 149 aa24.18■■□□□ 1.46
CD47-202ENST00000361309 CALM2P0DP24 149 aa24.18■■□□□ 1.46
CD47-202ENST00000361309 CALM3P0DP25 149 aa24.18■■□□□ 1.46
CD47-202ENST00000361309 IRS1P35568 1242 aa24.18■■□□□ 1.46
CD47-202ENST00000361309 SMAD2Q15796 467 aaKnown RBP24.18■■□□□ 1.46
CD47-202ENST00000361309 IER5Q5VY09 327 aa24.18■■□□□ 1.46
CD47-202ENST00000361309 RTN4RL1Q86UN2 441 aaPredicted RBP24.18■■□□□ 1.46
CD47-202ENST00000361309 JPH1Q9HDC5 661 aaPredicted RBP24.18■■□□□ 1.46
CD47-202ENST00000361309 PLAGL2Q9UPG8 496 aa24.18■■□□□ 1.46
CD47-202ENST00000361309 MRPL42Q9Y6G3 142 aaKnown RBP24.18■■□□□ 1.46
CD47-202ENST00000361309 ZNF318Q5VUA4 2279 aa24.17■■□□□ 1.46
CD47-202ENST00000361309 LINC01565O15544 149 aa24.17■■□□□ 1.46
CD47-202ENST00000361309 RPLP2P05387 115 aaKnown RBP24.17■■□□□ 1.46
CD47-202ENST00000361309 LIFRP42702 1097 aa24.17■■□□□ 1.46
CD47-202ENST00000361309 TMEM62Q0P6H9 643 aa24.17■■□□□ 1.46
CD47-202ENST00000361309 CAMK1Q14012 370 aa24.17■■□□□ 1.46
CD47-202ENST00000361309 AZI2Q9H6S1 392 aa24.17■■□□□ 1.46
CD47-202ENST00000361309 SLC9A2Q9UBY0 812 aa24.17■■□□□ 1.46
CD47-202ENST00000361309 TRPC6Q9Y210 931 aa24.17■■□□□ 1.46
CD47-202ENST00000361309 TRPV2Q9Y5S1 764 aa24.17■■□□□ 1.46
CD47-202ENST00000361309 FNDC1Q4ZHG4 1894 aaPredicted RBP24.17■■□□□ 1.46
CD47-202ENST00000361309 TBX10O75333 385 aa24.16■■□□□ 1.46
CD47-202ENST00000361309 TMTC3Q6ZXV5 915 aa24.16■■□□□ 1.46
CD47-202ENST00000361309 HEATR3Q7Z4Q2 680 aa24.16■■□□□ 1.46
CD47-202ENST00000361309 CMTR2Q8IYT2 770 aaKnown RBP24.16■■□□□ 1.46
CD47-202ENST00000361309 CRIPAKQ8N1N5 446 aa24.16■■□□□ 1.46
CD47-202ENST00000361309 TRAPPC12Q8WVT3 735 aa24.16■■□□□ 1.46
CD47-202ENST00000361309 P2RX5Q93086 422 aa24.16■■□□□ 1.46
CD47-202ENST00000361309 FTHL17Q9BXU8 183 aa24.16■■□□□ 1.46
CD47-202ENST00000361309 LRRC2Q9BYS8 371 aa24.16■■□□□ 1.46
CD47-202ENST00000361309 UPF3BQ9BZI7 483 aaKnown RBP24.16■■□□□ 1.46
CD47-202ENST00000361309 KCNH7Q9NS40 1196 aa24.16■■□□□ 1.46
CD47-202ENST00000361309 SLC12A7Q9Y666 1083 aa24.16■■□□□ 1.46
CD47-202ENST00000361309 SQORQ9Y6N5 450 aa24.16■■□□□ 1.46
CD47-202ENST00000361309 M0QZ92 97 aa24.15■■□□□ 1.46
CD47-202ENST00000361309 ADAM15Q13444 863 aa24.15■■□□□ 1.46
CD47-202ENST00000361309 SMAD4Q13485 552 aaKnown RBP24.15■■□□□ 1.46
CD47-202ENST00000361309 PLCB4Q15147 1175 aa24.15■■□□□ 1.46
CD47-202ENST00000361309 PAN2Q504Q3 1202 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms