RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 NOL9Q5SY16 702 aaKnown RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 RNF10Q8N5U6 811 aaKnown RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 CCDC155Q8N6L0 562 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 LARP4BQ92615 738 aaKnown RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 PIGSQ96S52 555 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 CPVLQ9H3G5 476 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 MMRN2Q9H8L6 949 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 TMX2Q9Y320 296 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 RRP15Q9Y3B9 282 aaKnown RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 SSU72P8A0A1W2PR75 194 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 A0A1W2PRG0 241 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 USP17L5A8MUK1 530 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 AGPSO00116 658 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 NKRFO15226 690 aaKnown RBP eCLIP13.68□□□□□ -0.22
UBA3-202ENST00000361055 AKR1B10O60218 316 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 MAGEA1P43355 309 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 EHHADHQ08426 723 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
UBA3-202ENST00000361055 ASTE1Q2TB18 679 aaPredicted RBP13.68□□□□□ -0.22
UBA3-202ENST00000361055 POTEDQ86YR6 584 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 GMCL1P1Q8NEA9 526 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 SPATA4Q8NEY3 305 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 BAP1Q92560 729 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 RAD54LQ92698 747 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 HPS3Q969F9 1004 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 CDK5RAP3Q96JB5 506 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 ALS2CR12Q96Q35 445 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 NUCKS1Q9H1E3 243 aaKnown RBP13.68□□□□□ -0.22
UBA3-202ENST00000361055 RASSF4Q9H2L5 321 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 DEF6Q9H4E7 631 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 VAT1LQ9HCJ6 419 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 PICK1Q9NRD5 415 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 HYOU1Q9Y4L1 999 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 A0A0U1RQG5 324 aaPredicted RBP13.68□□□□□ -0.22
UBA3-202ENST00000361055 F5H6K3 240 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 ZMYND10O75800 440 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 MYBL2P10244 700 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 GGCXP38435 758 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 ECE1P42892 770 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 KLRC3Q07444 240 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 C2orf54Q08AI8 447 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 ASPRV1Q53RT3 343 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 RRAGAQ7L523 313 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 SYN2Q92777 582 aaPredicted RBP13.68□□□□□ -0.22
UBA3-202ENST00000361055 OSBPL9Q96SU4 736 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 TSG101Q99816 390 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 GOPCQ9HD26 462 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 FAM207AQ9NSI2 230 aaPredicted RBP13.68□□□□□ -0.22
UBA3-202ENST00000361055 RNF14Q9UBS8 474 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 LCMT1Q9UIC8 334 aa13.68□□□□□ -0.22
UBA3-202ENST00000361055 EPHB6O15197 1021 aa13.67□□□□□ -0.22
UBA3-202ENST00000361055 MOCS3O95396 460 aa13.67□□□□□ -0.22
UBA3-202ENST00000361055 PTPRAP18433 802 aa13.67□□□□□ -0.22
UBA3-202ENST00000361055 GPATCH4Q5T3I0 446 aaKnown RBP13.67□□□□□ -0.22
UBA3-202ENST00000361055 ACER1Q8TDN7 264 aa13.67□□□□□ -0.22
UBA3-202ENST00000361055 LRRC1Q9BTT6 524 aa13.67□□□□□ -0.22
UBA3-202ENST00000361055 AS3MTQ9HBK9 375 aa13.67□□□□□ -0.22
UBA3-202ENST00000361055 CAPN6Q9Y6Q1 641 aa13.67□□□□□ -0.22
UBA3-202ENST00000361055 TRAF5O00463 557 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 EDIL3O43854 480 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 PPFIA4O75335 1185 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 PAFAH1B1P43034 410 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 TTLL12Q14166 644 aaPredicted RBP13.66□□□□□ -0.22
UBA3-202ENST00000361055 TMEM119Q4V9L6 283 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 GLE1Q53GS7 698 aaKnown RBP13.66□□□□□ -0.22
UBA3-202ENST00000361055 KRT79Q5XKE5 535 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 SLFN13Q68D06 897 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 LRRC55Q6ZSA7 311 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.66□□□□□ -0.22
UBA3-202ENST00000361055 ARMC9Q7Z3E5 817 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 ANKRD13AQ8IZ07 590 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 SMCR8Q8TEV9 937 aaPredicted RBP13.66□□□□□ -0.22
UBA3-202ENST00000361055 DCAF4Q8WV16 495 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 ZBTB9Q96C00 473 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 MLXIPQ9HAP2 919 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 GPBP1L1Q9HC44 474 aaPredicted RBP13.66□□□□□ -0.22
UBA3-202ENST00000361055 TMEM260Q9NX78 707 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 TSKSQ9UJT2 592 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 CSADQ9Y600 493 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 TRPM7Q96QT4 1865 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 GOLGA6BA6NDN3 693 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 LRRC53A6NM62 1247 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 RBAK-RBAKDNI3L0D1 243 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 RAD21O60216 631 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 SHOX2O60902 331 aaPredicted RBP13.66□□□□□ -0.22
UBA3-202ENST00000361055 SLC1A4P43007 532 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 ADCY7P51828 1080 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 ZNF543Q08ER8 600 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 VGLL4Q14135 290 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 ALS2CLQ60I27 953 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 PPP4R3AQ6IN85 833 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 DDX12PQ92771 950 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 GMCL1Q96IK5 515 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 WDR18Q9BV38 432 aa13.66□□□□□ -0.22
UBA3-202ENST00000361055 UBA5Q9GZZ9 404 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms