RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 INO80BQ9C086 356 aaPredicted RBP13.18□□□□□ -0.3
CCDC144A-204ENST00000360524 COA1Q9GZY4 146 aa13.18□□□□□ -0.3
CCDC144A-204ENST00000360524 MYL1P05976 194 aa13.18□□□□□ -0.3
CCDC144A-204ENST00000360524 USP17L2Q6R6M4 530 aa13.18□□□□□ -0.3
CCDC144A-204ENST00000360524 CEP70Q8NHQ1 597 aa13.18□□□□□ -0.3
CCDC144A-204ENST00000360524 TXLNGQ9NUQ3 528 aa13.18□□□□□ -0.3
CCDC144A-204ENST00000360524 NOVA2Q9UNW9 492 aaKnown RBP13.18□□□□□ -0.3
CCDC144A-204ENST00000360524 CYP2D7A0A087X1C5 515 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 TMTC3Q6ZXV5 915 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 FAM160B2Q86V87 743 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 ABI1Q8IZP0 508 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 THOC1Q96FV9 657 aaKnown RBP13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 CCDC68Q9H2F9 335 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 PTPREP23469 700 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 RASGRF1Q13972 1273 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 ANKRD20A4Q4UJ75 823 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 ANKRD20A8PQ5CZ79 823 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 ANKRD20A2Q5SQ80 823 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 ANKRD20A1Q5TYW2 823 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 CDC42BPGQ6DT37 1551 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 RTKN2Q8IZC4 609 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 ST13P4Q8IZP2 240 aaPredicted RBP13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 LINC00301Q8NCQ3 95 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 ZC4H2Q9NQZ6 224 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 ZSWIM5Q9P217 1185 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 TOM1L1O75674 476 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 CPP00450 1065 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 IFNAR1P17181 557 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 MSH2P43246 934 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 BASP1P80723 227 aaKnown RBP13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 RNASELQ05823 741 aaKnown RBP13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 CDC37Q16543 378 aaPredicted RBP13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 PAGE5Q96GU1 130 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 FAM81BQ96LP2 452 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 SUFUQ9UMX1 484 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 PGRMC1O00264 195 aaKnown RBP13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 IKBKBO14920 756 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 NR1D1P20393 614 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 METTL23Q86XA0 190 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 CCNYQ8ND76 341 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 SDCCAG3Q96C92 435 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 RWDD2AQ9UIY3 292 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 CYP27A1Q02318 531 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 DYNC1I2Q13409 638 aaKnown RBP13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 MAN2A1Q16706 1144 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
CCDC144A-204ENST00000360524 TARBP1Q13395 1621 aaKnown RBP13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 GPC4O75487 556 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 CDK8P49336 464 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 ACTN3Q08043 901 aaPredicted RBP13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 FOXD4Q12950 439 aaPredicted RBP13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 SLMAPQ14BN4 828 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 TOGARAM2Q6ZUX3 1019 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 TTLL11Q8NHH1 800 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 PIP4K2CQ8TBX8 421 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 SNX25Q9H3E2 840 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 RPAP1Q9BWH6 1393 aaPredicted RBP13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 SLFN14P0C7P3 912 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 PLS3P13797 630 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 PDCD2Q16342 344 aaPredicted RBP13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 DARS2Q6PI48 645 aaKnown RBP13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 MIGA2Q7L4E1 593 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 MYLK4Q86YV6 388 aaPredicted RBP13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 VSTM4Q8IW00 320 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 MASTLQ96GX5 879 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 UBN2Q6ZU65 1347 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 CSPG5O95196 566 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 PSAPP07602 524 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 DDIT3P35638 169 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 IREB2P48200 963 aaKnown RBP13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 OSTNP61366 133 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 HDLBPQ00341 1268 aaKnown RBP13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 TMTC4Q5T4D3 741 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 EP400NLQ6ZTU2 488 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 KCTD6Q8NC69 237 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 IPO11Q9UI26 975 aaKnown RBP13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 PNMA6FA0A0J9YX94 578 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 H7C1W4 665 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 INPP1P49441 399 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 LMNB2Q03252 620 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 CLEC4GQ6UXB4 293 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 PPWD1Q96BP3 646 aaKnown RBP13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 SPZ1Q9BXG8 430 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 BAG5Q9UL15 447 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 PREX2Q70Z35 1606 aa13.16□□□□□ -0.3
CCDC144A-204ENST00000360524 TTC4O95801 387 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 S100BP04271 92 aaPredicted RBP13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 ATP1A3P13637 1013 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 CCDC92Q53HC0 331 aaPredicted RBP13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 MUM1L1Q5H9M0 696 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 HP1BP3Q5SSJ5 553 aaPredicted RBP13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 ZNF449Q6P9G9 518 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 FOXP4Q8IVH2 680 aaPredicted RBP13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 CHMP6Q96FZ7 201 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 FNDC3AQ9Y2H6 1198 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms