RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 NCLNQ969V3 563 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 NAF1Q96HR8 494 aaKnown RBP14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 FAM161BQ96MY7 647 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 AP5M1Q9H0R1 490 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 BLMP54132 1417 aaPredicted RBP14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 H0Y626 953 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 TRIM16O95361 564 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 CFBP00751 764 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 RECQLP46063 649 aaPredicted RBP14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 FBXW10Q5XX13 1052 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 NOSTRINQ8IVI9 506 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 TRIM62Q9BVG3 475 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 PCDHA7Q9UN72 937 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 ATP10DQ9P241 1426 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 ACEP12821 1306 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 FTCDO95954 541 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 POLR2MP0CAP2 368 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 GAP43P17677 238 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 TSPY1Q01534 308 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 NLRP14Q86W24 1093 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 PPM1KQ8N3J5 372 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 GSPT1P15170 499 aaKnown RBP14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 TEKT3Q9BXF9 490 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 ETNK1Q9HBU6 452 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 CNGB3Q9NQW8 809 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 SELENONQ9NZV5 590 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 MORC2Q9Y6X9 1032 aaPredicted RBP14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 ZSCAN20P17040 1043 aaPredicted RBP14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 AP1B1Q10567 949 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 CYLC2Q14093 348 aaPredicted RBP14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 KIRREL3Q8IZU9 778 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 DNAAF3Q8N9W5 541 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 PHF21AQ96BD5 680 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 hCG_1642624A0A1W2PR95 340 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 K7ENM7 598 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 SLC4A1P02730 911 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 FAM47EQ6ZV65 393 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 L3MBTL1Q9Y468 752 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 ZBTB7BO15156 539 aaPredicted RBP14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 CC2D1AQ6P1N0 951 aaPredicted RBP14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 RASSF3Q86WH2 238 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 LPIN2Q92539 896 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 ZMYM4Q5VZL5 1548 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 RIMBP2O15034 1052 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 GTPBP6O43824 516 aaPredicted RBP14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 TMPRSS15P98073 1019 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 RNF139Q8WU17 664 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 AP1M1Q9BXS5 423 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 ARMT1Q9H993 441 aa14.15□□□□□ -0.14
SRGAP3-201ENST00000360413 GOLGA8RI6L899 631 aa14.15□□□□□ -0.15
SRGAP3-201ENST00000360413 USH1GQ495M9 461 aa14.15□□□□□ -0.15
SRGAP3-201ENST00000360413 NEK8Q86SG6 692 aa14.15□□□□□ -0.15
SRGAP3-201ENST00000360413 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.15□□□□□ -0.15
SRGAP3-201ENST00000360413 MMTAG2Q9BU76 263 aaKnown RBP14.15□□□□□ -0.15
SRGAP3-201ENST00000360413 KLC2Q9H0B6 622 aa14.15□□□□□ -0.15
SRGAP3-201ENST00000360413 AATFQ9NY61 560 aaKnown RBP eCLIP14.15□□□□□ -0.15
SRGAP3-201ENST00000360413 MAGOHP61326 146 aaKnown RBP14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 SNX19Q92543 992 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 SH3GL1Q99961 368 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 NHEJ1Q9H9Q4 299 aaPredicted RBP14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 NBPF26B4DH59 902 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 WDR47O94967 919 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 KITP10721 976 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 MAPK4P31152 587 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 TRIM67Q6ZTA4 783 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 ADCK1Q86TW2 530 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 NBPF15Q8N660 670 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 COQ7Q99807 217 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 SLC39A2Q9NP94 309 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 FARP1Q9Y4F1 1045 aaPredicted RBP14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 VCAM1P19320 739 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 NSMFQ6X4W1 530 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 TBC1D19Q8N5T2 526 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 SLC38A10Q9HBR0 1119 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 HPCAL4Q9UM19 191 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 COBLO75128 1261 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 VAMP4O75379 141 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 TECP42680 631 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 BASP1P80723 227 aaKnown RBP14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 PTPN21Q16825 1174 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 TMEM154Q6P9G4 183 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 WDR75Q8IWA0 830 aaKnown RBP14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 MTMR6Q9Y217 621 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 PSMA4P25789 261 aaKnown RBP14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 ADAM9Q13443 819 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 FASTKD5Q7L8L6 764 aaKnown RBP14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 SULF1Q8IWU6 871 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 TTC17Q96AE7 1141 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 IL17RAQ96F46 866 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 EEF2KMTQ96G04 330 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 AK8Q96MA6 479 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 KDRP35968 1356 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 KCNA3P22001 575 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 PAPOLAP51003 745 aaKnown RBP14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 TAF1BQ53T94 588 aaPredicted RBP14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 RNF217Q8TC41 542 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 RPRD2Q5VT52 1461 aaKnown RBP14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 NUMA1Q14980 2115 aa14.14□□□□□ -0.15
SRGAP3-201ENST00000360413 GNL1P36915 607 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms