RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 ALPK3Q96L96 1907 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 A0A087WWV3 80 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 A0A0U1RQG5 324 aaPredicted RBP7.23□□□□□ -1.25
SUDS3-201ENST00000360286 POTEMA6NI47 508 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 WDR64B1ANS9 1081 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 RBAK-RBAKDNI3L0D1 243 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 BACH1O14867 736 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 F2P00734 622 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 DDIT3P35638 169 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 JAK3P52333 1124 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 RTP1P59025 263 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 PLCB2Q00722 1185 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 TLE2Q04725 743 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 SPIRE1Q08AE8 756 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 PPP2R5CQ13362 524 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 ORC2Q13416 577 aaPredicted RBP7.23□□□□□ -1.25
SUDS3-201ENST00000360286 CTTNQ14247 550 aaKnown RBP7.23□□□□□ -1.25
SUDS3-201ENST00000360286 PLCB4Q15147 1175 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 PTPAQ15257 358 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 EPHA7Q15375 998 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 UGCGQ16739 394 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 TRIM60Q495X7 471 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 FAM47CQ5HY64 1035 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 GDF6Q6KF10 455 aaPredicted RBP7.23□□□□□ -1.25
SUDS3-201ENST00000360286 PLPPR4Q7Z2D5 763 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 SMAP1Q8IYB5 467 aaPredicted RBP7.23□□□□□ -1.25
SUDS3-201ENST00000360286 SLC43A3Q8NBI5 491 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 DPF3Q92784 378 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 ZBTB10Q96DT7 871 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 DYDC2Q96IM9 177 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 TRPV6Q9H1D0 765 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 SMARCAD1Q9H4L7 1026 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 AZI2Q9H6S1 392 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 RNF216Q9NWF9 866 aaPredicted RBP7.23□□□□□ -1.25
SUDS3-201ENST00000360286 RGL1Q9NZL6 768 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 HDAC6Q9UBN7 1215 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 TCEAL9Q9UHQ7 104 aa7.23□□□□□ -1.25
SUDS3-201ENST00000360286 MAFBQ9Y5Q3 323 aaPredicted RBP7.23□□□□□ -1.25
SUDS3-201ENST00000360286 ZBTB39O15060 712 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 ZNF862O60290 1169 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 B4GALT4O60513 344 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 PQBP1O60828 265 aaKnown RBP7.22□□□□□ -1.25
SUDS3-201ENST00000360286 SLITRK3O94933 977 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 STBD1O95210 358 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 SMIM10L2AP0DMW4 78 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 SMIM10L2BP0DMW5 78 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 PDIA4P13667 645 aaKnown RBP7.22□□□□□ -1.25
SUDS3-201ENST00000360286 MARCKSP29966 332 aaPredicted RBP7.22□□□□□ -1.25
SUDS3-201ENST00000360286 CDC25AP30304 524 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 SFNP31947 248 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 ATP2C1P98194 919 aaPredicted RBP7.22□□□□□ -1.25
SUDS3-201ENST00000360286 DNM1Q05193 864 aaKnown RBP7.22□□□□□ -1.25
SUDS3-201ENST00000360286 GRIN1Q05586 938 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 FAAP100Q0VG06 881 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 SNX17Q15036 470 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 C1orf53Q5VUE5 145 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 FAM160B1Q5W0V3 765 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 PDXDC2PQ6P474 469 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 NFRKBQ6P4R8 1299 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 DTHD1Q6ZMT9 781 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 SH3RF1Q7Z6J0 888 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 CKAP2LQ8IYA6 745 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 C7orf31Q8N865 590 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 BANK1Q8NDB2 785 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 AFAP1L1Q8TED9 768 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 ZNF396Q96N95 335 aaPredicted RBP7.22□□□□□ -1.25
SUDS3-201ENST00000360286 EIF2AK1Q9BQI3 630 aaKnown RBP7.22□□□□□ -1.25
SUDS3-201ENST00000360286 KATNAL1Q9BW62 490 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 TRMT13Q9NUP7 481 aaKnown RBP7.22□□□□□ -1.25
SUDS3-201ENST00000360286 SETD4Q9NVD3 440 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 ERAP1Q9NZ08 941 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 WRAP73Q9P2S5 460 aaPredicted RBP7.22□□□□□ -1.25
SUDS3-201ENST00000360286 ZNF215Q9UL58 517 aaPredicted RBP7.22□□□□□ -1.25
SUDS3-201ENST00000360286 TCHHQ07283 1943 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 MYH15Q9Y2K3 1946 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 TNRC18O15417 2968 aaPredicted RBP7.22□□□□□ -1.25
SUDS3-201ENST00000360286 EMSYQ7Z589 1322 aa7.22□□□□□ -1.25
SUDS3-201ENST00000360286 POTEB3A0JP26 581 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 C17orf102A2RUQ5 167 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 TMEM150BA6NC51 233 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 VWA3AA6NCI4 1184 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 DDX11L8A8MPP1 907 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 PP2D1A8MPX8 630 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 LAD1O00515 517 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 TREHO43280 583 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 EVI5O60447 810 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 MED24O75448 989 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 CD4P01730 458 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 P4HBP07237 508 aaKnown RBP7.21□□□□□ -1.26
SUDS3-201ENST00000360286 SPATA31C1P0DKV0 1188 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 CYP2C9P11712 490 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 INSRRP14616 1297 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 PRPHP41219 470 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 QARSP47897 775 aaKnown RBP7.21□□□□□ -1.26
SUDS3-201ENST00000360286 FXR2P51116 673 aaKnown RBP eCLIP7.21□□□□□ -1.26
SUDS3-201ENST00000360286 PSMC5P62195 406 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 IGBP1P78318 339 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 NUCB2P80303 420 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 CYP4A11Q02928 519 aa7.21□□□□□ -1.26
SUDS3-201ENST00000360286 PTPN11Q06124 597 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms