RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 GFPT1Q06210 699 aaPredicted RBP12.23□□□□□ -0.45
TMC3-201ENST00000359440 SUSD4Q5VX71 490 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 NLRX1Q86UT6 975 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 STAG2Q8N3U4 1231 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 UHMK1Q8TAS1 419 aaKnown RBP12.23□□□□□ -0.45
TMC3-201ENST00000359440 HVCN1Q96D96 273 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 FAM212AQ96EL1 285 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 AP1M1Q9BXS5 423 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 COL15A1P39059 1388 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 PPP1R3GB7ZBB8 358 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 ZNF18P17022 549 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 ALDH1B1P30837 517 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 GTF2IP78347 998 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 KCNH2Q12809 1159 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 SLC18A3Q16572 532 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 DDX17Q92841 729 aaKnown RBP12.23□□□□□ -0.45
TMC3-201ENST00000359440 KLC4Q9NSK0 619 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 SEL1LQ9UBV2 794 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 SPATA31A3Q5VYP0 1347 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 IFNB1P01574 187 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 CDK8P49336 464 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 COASYQ13057 564 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 PTPROQ16827 1216 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 PAPD7Q5XG87 772 aaKnown RBP12.23□□□□□ -0.45
TMC3-201ENST00000359440 SUPT20HQ8NEM7 779 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 MRRFQ96E11 262 aaKnown RBP12.23□□□□□ -0.45
TMC3-201ENST00000359440 DNAJC7Q99615 494 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 PKD2L1Q9P0L9 805 aa12.23□□□□□ -0.45
TMC3-201ENST00000359440 ZBED4O75132 1171 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 MAGOHP61326 146 aaKnown RBP12.22□□□□□ -0.45
TMC3-201ENST00000359440 PLCB4Q15147 1175 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 SBK1Q52WX2 424 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 CCDC93Q567U6 631 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 USP17L2Q6R6M4 530 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 FRMD5Q7Z6J6 570 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 PARP9Q8IXQ6 854 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 GSPT2Q8IYD1 628 aaKnown RBP12.22□□□□□ -0.45
TMC3-201ENST00000359440 PPP4R1Q8TF05 950 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 KAZALD1Q96I82 304 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 FAM20AQ96MK3 541 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 TMEM47Q9BQJ4 181 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 DHX36Q9H2U1 1008 aaKnown RBP12.22□□□□□ -0.45
TMC3-201ENST00000359440 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 NOC2LQ9Y3T9 749 aaKnown RBP12.22□□□□□ -0.45
TMC3-201ENST00000359440 ADAMTS13Q76LX8 1427 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 TMEM131LA2VDJ0 1609 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 PRPF6O94906 941 aaKnown RBP12.22□□□□□ -0.45
TMC3-201ENST00000359440 CYP4A11Q02928 519 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 ANKRD40Q6AI12 368 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 SMC1BQ8NDV3 1235 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 RILPQ96NA2 401 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 IPO5O00410 1097 aaKnown RBP12.22□□□□□ -0.45
TMC3-201ENST00000359440 P4HA1P13674 534 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 DMP1Q13316 513 aaPredicted RBP12.22□□□□□ -0.45
TMC3-201ENST00000359440 NT5DC1Q5TFE4 455 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 CDKAL1Q5VV42 579 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 TRIM65Q6PJ69 517 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 NOA1Q8NC60 698 aaKnown RBP12.22□□□□□ -0.45
TMC3-201ENST00000359440 KIFC2Q96AC6 838 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 BATF3Q9NR55 127 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 CEP170BQ9Y4F5 1589 aaPredicted RBP12.22□□□□□ -0.45
TMC3-201ENST00000359440 MXI1P50539 228 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 PMS2P54278 862 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 SLC20A2Q08357 652 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 HLFQ16534 295 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 TRIM68Q6AZZ1 485 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 MAEAQ7L5Y9 396 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 RFFLQ8WZ73 363 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 VCX3AQ9NNX9 186 aa12.22□□□□□ -0.45
TMC3-201ENST00000359440 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
TMC3-201ENST00000359440 FAM237AA0A1B0GTK4 181 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 ANKRD65E5RJM6 399 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 VPS41P49754 854 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 SLC8A3P57103 927 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 TAF11Q15544 211 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 NUGGCQ68CJ6 796 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 CD2APQ9Y5K6 639 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 CLTCQ00610 1675 aaKnown RBP12.21□□□□□ -0.45
TMC3-201ENST00000359440 SALL1Q9NSC2 1324 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 RPSAP08865 295 aaKnown RBP12.21□□□□□ -0.45
TMC3-201ENST00000359440 KNOP1Q1ED39 458 aaKnown RBP12.21□□□□□ -0.45
TMC3-201ENST00000359440 HSP90AA5PQ58FG0 334 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 COA7Q96BR5 231 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 CCT8L2Q96SF2 557 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 ELAC2Q9BQ52 826 aaKnown RBP12.21□□□□□ -0.45
TMC3-201ENST00000359440 ANO3Q9BYT9 981 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 PTPN22Q9Y2R2 807 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 DIP2AQ14689 1571 aa12.21□□□□□ -0.45
TMC3-201ENST00000359440 TRIM66O15016 1216 aa12.21□□□□□ -0.46
TMC3-201ENST00000359440 TOM1O60784 492 aa12.21□□□□□ -0.46
TMC3-201ENST00000359440 BBOX1O75936 387 aa12.21□□□□□ -0.46
TMC3-201ENST00000359440 ZRANB2O95218 330 aaKnown RBP eCLIP12.21□□□□□ -0.46
TMC3-201ENST00000359440 PPARDQ03181 441 aa12.21□□□□□ -0.46
TMC3-201ENST00000359440 TBX2Q13207 712 aaPredicted RBP12.21□□□□□ -0.46
TMC3-201ENST00000359440 FAM133BQ5BKY9 247 aaKnown RBP12.21□□□□□ -0.46
TMC3-201ENST00000359440 ZNF473Q8WTR7 871 aaKnown RBP12.21□□□□□ -0.46
TMC3-201ENST00000359440 HOOK2Q96ED9 719 aa12.21□□□□□ -0.46
TMC3-201ENST00000359440 TTC25Q96NG3 672 aa12.21□□□□□ -0.46
TMC3-201ENST00000359440 SCOCQ9UIL1 159 aa12.21□□□□□ -0.46
TMC3-201ENST00000359440 PLAGL2Q9UPG8 496 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms