RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 RPN1P04843 607 aaKnown RBP15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 MUTP22033 750 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 CASP1P29466 404 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 CNTN2Q02246 1040 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 MCM6Q14566 821 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 PWP2Q15269 919 aaKnown RBP15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 EPHA7Q15375 998 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 MTFR1Q15390 333 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 ISM2Q6H9L7 571 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 MLKLQ8NB16 471 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 C7orf25Q9BPX7 421 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 PORCNQ9H237 461 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 PKD2L1Q9P0L9 805 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 CPA4Q9UI42 421 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 KIAA1024Q9UPX6 916 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 ZSWIM8A7E2V4 1837 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 BECN2A8MW95 431 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 DDX39AO00148 427 aaKnown RBP15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 SPATA31C1P0DKV0 1188 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 ASIC1P78348 528 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 KRT76Q01546 638 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 PDE4DQ08499 809 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 KCNB1Q14721 858 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 IQCB1Q15051 598 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 ECM1Q16610 540 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 POTEGQ6S5H5 508 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 C17orf99Q6UX52 265 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 B3GNT9Q6UX72 402 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 MIER3Q7Z3K6 550 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 PLEKHH3Q7Z736 793 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 LUZP1Q86V48 1076 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 CATSPER3Q86XQ3 398 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 GTPBP4Q9BZE4 634 aaKnown RBP15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 TRIM9Q9C026 710 aa15.46■□□□□ 0.07
PDLIM5-203ENST00000359265 NFASCO94856 1347 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 DNAJC25-GNG10A0A024R161 153 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 SOWAHBA6NEL2 793 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 SMTNL1A8MU46 457 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 DHX15O43143 795 aaKnown RBP15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 EIF3JO75822 258 aaKnown RBP15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 EDNRBP24530 442 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 JAK3P52333 1124 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 TPM4P67936 248 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 CYP4A11Q02928 519 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 ITGB3BPQ13352 177 aaPredicted RBP15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 DHX8Q14562 1220 aaKnown RBP15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 CT47A1Q5JQC4 288 aaPredicted RBP15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 CNNM4Q6P4Q7 775 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 KCNK18Q7Z418 384 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 GPR142Q7Z601 462 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 AOPEPQ8N6M6 819 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 RDM1Q8NG50 284 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 SLC5A4Q9NY91 659 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 RAPGEFL1Q9UHV5 662 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 DNM3Q9UQ16 869 aa15.45■□□□□ 0.06
PDLIM5-203ENST00000359265 ASTN1O14525 1302 aa15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 SPTBN5Q9NRC6 3674 aaKnown RBP15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 E9PMD0 336 aa15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 SSBP05455 408 aaKnown RBP eCLIP15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 PLA2G4BP0C869 781 aa15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 BMP6P22004 513 aa15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 SFNP31947 248 aa15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 ICAM3P32942 547 aa15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 KMT5BQ4FZB7 885 aa15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 ZNF658Q5TYW1 1059 aaPredicted RBP15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 DHX40Q8IX18 779 aaKnown RBP15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 DYDC2Q96IM9 177 aa15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 BMP2KQ9NSY1 1161 aaPredicted RBP15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 EXOC1Q9NV70 894 aa15.44■□□□□ 0.06
PDLIM5-203ENST00000359265 PVALEFA0A1B0GWK0 134 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 MYMKA6NI61 221 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 SLC15A5A6NIM6 579 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 WDR64B1ANS9 1081 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 SPATA31C2B4DYI2 1134 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 IKBKBO14920 756 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 KLRC4O43908 158 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 RHOBTB3O94955 611 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 EYA4O95677 639 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 PGK2P07205 417 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 ADORA2AP29274 412 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 CTTNQ14247 550 aaKnown RBP15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 GRB14Q14449 540 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 ZNF746Q6NUN9 644 aaPredicted RBP15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 UNC13DQ70J99 1090 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 TPH2Q8IWU9 490 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 HSD17B14Q9BPX1 270 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 RGL1Q9NZL6 768 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 NR2E3Q9Y5X4 410 aa15.43■□□□□ 0.06
PDLIM5-203ENST00000359265 ASB14A6NK59 587 aa15.42■□□□□ 0.06
PDLIM5-203ENST00000359265 ATP9AO75110 1047 aa15.42■□□□□ 0.06
PDLIM5-203ENST00000359265 RGS20O76081 388 aa15.42■□□□□ 0.06
PDLIM5-203ENST00000359265 KCNA2P16389 499 aa15.42■□□□□ 0.06
PDLIM5-203ENST00000359265 COL9A1P20849 921 aa15.42■□□□□ 0.06
PDLIM5-203ENST00000359265 ERCC5P28715 1186 aaPredicted RBP15.42■□□□□ 0.06
PDLIM5-203ENST00000359265 PPP1R2P41236 205 aa15.42■□□□□ 0.06
PDLIM5-203ENST00000359265 MYL5Q02045 173 aa15.42■□□□□ 0.06
PDLIM5-203ENST00000359265 CCDC173Q0VFZ6 552 aa15.42■□□□□ 0.06
PDLIM5-203ENST00000359265 GPR153Q6NV75 609 aa15.42■□□□□ 0.06
PDLIM5-203ENST00000359265 DPP9Q86TI2 863 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms