RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OLFML2BQ68BL8 750 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 EDC3Q96F86 508 aaKnown RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 FAM161BQ96MY7 647 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 EPC1Q9H2F5 836 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 KIF9Q9HAQ2 790 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 PDP2Q9P2J9 529 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 ESYT2A0FGR8 921 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 CCZ1BP86790 482 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 CCZ1P86791 482 aaPredicted RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 RDH13Q8NBN7 331 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 RNF169Q8NCN4 708 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 HIPK4Q8NE63 616 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 SEC16BQ96JE7 1060 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 RMDN2Q96LZ7 410 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 SLITRK6Q9H5Y7 841 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 KIAA1210Q9ULL0 1709 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 F8W031 263 aaPredicted RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 H0YCG3 227 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 TMEM154Q6P9G4 183 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 DNAJC9Q8WXX5 260 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 FAM89AQ96GI7 184 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 ANKRD27Q96NW4 1050 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 USP15Q9Y4E8 981 aaPredicted RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 IQGAP3Q86VI3 1631 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 EIF4E1BA6NMX2 242 aaKnown RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 CYP21A2P08686 494 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 MRPS15P82914 257 aaKnown RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 ARL6IP4Q66PJ3 421 aaKnown RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 LRIG3Q6UXM1 1119 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 SPATA4Q8NEY3 305 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 GJA10Q969M2 543 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 ZBTB10Q96DT7 871 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 SLC40A1Q9NP59 571 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 ATP8A2Q9NTI2 1148 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 DBNLQ9UJU6 430 aaKnown RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 SAT1P21673 171 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 BZW1Q7L1Q6 419 aaKnown RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 IFNL3Q8IZI9 196 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 FMR1NBQ8N0W7 255 aaPredicted RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 MRPL47Q9HD33 250 aaKnown RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 MID2Q9UJV3 735 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 GFAPP14136 432 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 PSMC2P35998 433 aaKnown RBP9.42□□□□□ -0.9
COL6A6-201ENST00000358511 PIK3CAP42336 1068 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 CASP2P42575 452 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 GOLPH3LQ9H4A5 285 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 CEP72Q9P209 647 aa9.42□□□□□ -0.9
COL6A6-201ENST00000358511 MRPS25P82663 173 aaKnown RBP9.41□□□□□ -0.9
COL6A6-201ENST00000358511 ZMYM1Q5SVZ6 1142 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 RAB44Q7Z6P3 723 aaPredicted RBP9.41□□□□□ -0.9
COL6A6-201ENST00000358511 PGBD1Q96JS3 809 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 MOV10L1Q9BXT6 1211 aaKnown RBP9.41□□□□□ -0.9
COL6A6-201ENST00000358511 SENP1Q9P0U3 644 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 SFMBT1Q9UHJ3 866 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 ZDHHC9Q9Y397 364 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 ADCY10Q96PN6 1610 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 CTCFP49711 727 aaPredicted RBP9.41□□□□□ -0.9
COL6A6-201ENST00000358511 IRAK1P51617 712 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 SP4Q02446 784 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 NYAP1Q6ZVC0 841 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 PROM2Q8N271 834 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 ESYT3A0FGR9 886 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 GPKOWQ92917 476 aaPredicted RBP eCLIP9.41□□□□□ -0.9
COL6A6-201ENST00000358511 TTC1Q99614 292 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 TRPV6Q9H1D0 765 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 CDK12Q9NYV4 1490 aaPredicted RBP9.41□□□□□ -0.9
COL6A6-201ENST00000358511 PFDN6O15212 129 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 CFLARO15519 480 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 KRT4P19013 534 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 BYSLQ13895 437 aaKnown RBP9.41□□□□□ -0.9
COL6A6-201ENST00000358511 SPATA21Q7Z572 469 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 PCGF5Q86SE9 256 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 PLEKHF1Q96S99 279 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 KRT82Q9NSB4 513 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 ITM2BQ9Y287 266 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 GFPT2O94808 682 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 PDE6AP16499 860 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 SERPINB3P29508 390 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 HOXC9P31274 260 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 RFC4P35249 363 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 DEPDC1BQ8WUY9 529 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 ZNF229Q9UJW7 825 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 H7C0C1 242 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 CCNE1P24864 410 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 ATP5OP48047 213 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 DISC1Q9NRI5 854 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 TMCC1O94876 653 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 CYB5D1Q6P9G0 228 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 RASGRP2Q7LDG7 609 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 EHD2Q9NZN4 543 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 DCTN4Q9UJW0 460 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 PCDHA4Q9UN74 947 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 KIAA1024Q9UPX6 916 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 GSTA4O15217 222 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 APOA1P02647 267 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 GAP43P17677 238 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 IL1RL1Q01638 556 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 MED21Q13503 144 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
COL6A6-201ENST00000358511 POMGNT1Q8WZA1 660 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms