RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PP2D1A8MPX8 630 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 KPNA6O60684 536 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 CUTAO60888 179 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 CDC25AP30304 524 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 GJA8P48165 433 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 CYP4A11Q02928 519 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 KCNA10Q16322 511 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 SPECC1Q5M775 1068 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 KRT79Q5XKE5 535 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 SWSAP1Q6NVH7 229 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 BANK1Q8NDB2 785 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 NEK9Q8TD19 979 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 SNX29Q8TEQ0 813 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 CRISPLD2Q9H0B8 497 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 GABBR1Q9UBS5 961 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 ZNF215Q9UL58 517 aaPredicted RBP17.11■□□□□ 0.33
TPM1-206ENST00000358278 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
TPM1-206ENST00000358278 DNM1LO00429 736 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 P4HBP07237 508 aaKnown RBP17.1■□□□□ 0.33
TPM1-206ENST00000358278 ASGR1P07306 291 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 TXLNAP40222 546 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 UBA7P41226 1012 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 STAT5BP51692 787 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 TPRNQ4KMQ1 711 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 RASSF8Q8NHQ8 419 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 ATP6V0A1Q93050 837 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 DYDC2Q96IM9 177 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 SMARCAD1Q9H4L7 1026 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 EVPLQ92817 2033 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 IGSF9BQ9UPX0 1349 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 GOLGA6L4A6NEF3 574 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 LGR5O75473 907 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 CCT6AP40227 531 aaKnown RBP17.1■□□□□ 0.33
TPM1-206ENST00000358278 QARSP47897 775 aaKnown RBP17.1■□□□□ 0.33
TPM1-206ENST00000358278 PURAQ00577 322 aaKnown RBP17.1■□□□□ 0.33
TPM1-206ENST00000358278 ZRSR1Q15695 479 aaKnown RBP17.1■□□□□ 0.33
TPM1-206ENST00000358278 PDXDC2PQ6P474 469 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 CXCL17Q6UXB2 119 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
TPM1-206ENST00000358278 LXNQ9BS40 222 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 TSEN34Q9BSV6 310 aaKnown RBP17.1■□□□□ 0.33
TPM1-206ENST00000358278 RGL1Q9NZL6 768 aa17.1■□□□□ 0.33
TPM1-206ENST00000358278 IGKV6D-21A0A0A0MT36 114 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 MOXD2PA6NHM9 499 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 H3BRB1 525 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 F2P00734 622 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 MARK3P27448 753 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 CHMP4BP1P59074 171 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 PSMC5P62195 406 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 CTTNQ14247 550 aaKnown RBP17.09■□□□□ 0.33
TPM1-206ENST00000358278 UGCGQ16739 394 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
TPM1-206ENST00000358278 CCSAPQ6IQ19 270 aaPredicted RBP17.09■□□□□ 0.33
TPM1-206ENST00000358278 CLEC17AQ6ZS10 378 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 CABP7Q86V35 215 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 TPH2Q8IWU9 490 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 CKAP2LQ8IYA6 745 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 ZNF579Q8NAF0 562 aaKnown RBP17.09■□□□□ 0.33
TPM1-206ENST00000358278 AFAP1L1Q8TED9 768 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 EPSTI1Q96J88 318 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 CDK5RAP3Q96JB5 506 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 PCYT2Q99447 389 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 C16orf70Q9BSU1 422 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 MTG1Q9BT17 334 aaPredicted RBP17.09■□□□□ 0.33
TPM1-206ENST00000358278 KATNAL1Q9BW62 490 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 TUT1Q9H6E5 874 aaKnown RBP17.09■□□□□ 0.33
TPM1-206ENST00000358278 ERAP1Q9NZ08 941 aa17.09■□□□□ 0.33
TPM1-206ENST00000358278 KDM3AQ9Y4C1 1321 aa17.08■□□□□ 0.33
TPM1-206ENST00000358278 MYH11P35749 1972 aa17.08■□□□□ 0.33
TPM1-206ENST00000358278 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.32
TPM1-206ENST00000358278 RPA1P27694 616 aa17.08■□□□□ 0.32
TPM1-206ENST00000358278 ACLYP53396 1101 aa17.08■□□□□ 0.32
TPM1-206ENST00000358278 ADALQ6DHV7 355 aa17.08■□□□□ 0.32
TPM1-206ENST00000358278 PLPPR4Q7Z2D5 763 aa17.08■□□□□ 0.32
TPM1-206ENST00000358278 TRMT1LQ7Z2T5 733 aaKnown RBP17.08■□□□□ 0.32
TPM1-206ENST00000358278 VTI1AQ96AJ9 217 aa17.08■□□□□ 0.32
TPM1-206ENST00000358278 CALML4Q96GE6 196 aa17.08■□□□□ 0.32
TPM1-206ENST00000358278 POLR3CQ9BUI4 534 aaPredicted RBP17.08■□□□□ 0.32
TPM1-206ENST00000358278 ZSWIM4Q9H7M6 989 aa17.08■□□□□ 0.32
TPM1-206ENST00000358278 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.32
TPM1-206ENST00000358278 MAFBQ9Y5Q3 323 aaPredicted RBP17.08■□□□□ 0.32
TPM1-206ENST00000358278 POTEB3A0JP26 581 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 MED24O75448 989 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 SLITRK3O94933 977 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 SLC26A2P50443 739 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 PRKCEQ02156 737 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 POTEBQ6S5H4 581 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 CATSPER3Q86XQ3 398 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 TNS4Q8IZW8 715 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 ABHD8Q96I13 439 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 GLT1D1Q96MS3 346 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 HSD17B14Q9BPX1 270 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 MMTAG2Q9BU76 263 aaKnown RBP17.07■□□□□ 0.32
TPM1-206ENST00000358278 GOLGA6L22H0YM25 854 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 CABYRO75952 493 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 CAPN2P17655 700 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 POTEGQ6S5H5 508 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 SHC4Q6S5L8 630 aa17.07■□□□□ 0.32
TPM1-206ENST00000358278 USP49Q70CQ1 688 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms