RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 MAD2L2Q9UI95 211 aa18.32■□□□□ 0.52
IFT20-202ENST00000357896 BARX2Q9UMQ3 279 aaPredicted RBP18.32■□□□□ 0.52
IFT20-202ENST00000357896 SQORQ9Y6N5 450 aa18.32■□□□□ 0.52
IFT20-202ENST00000357896 PALM3A6NDB9 673 aaPredicted RBP18.31■□□□□ 0.52
IFT20-202ENST00000357896 VCPP55072 806 aaKnown RBP18.31■□□□□ 0.52
IFT20-202ENST00000357896 PPFIA1Q13136 1202 aa18.31■□□□□ 0.52
IFT20-202ENST00000357896 IMMTQ16891 758 aaKnown RBP18.31■□□□□ 0.52
IFT20-202ENST00000357896 XRRA1Q6P2D8 792 aa18.31■□□□□ 0.52
IFT20-202ENST00000357896 CRIPAKQ8N1N5 446 aa18.31■□□□□ 0.52
IFT20-202ENST00000357896 MICAL1Q8TDZ2 1067 aa18.31■□□□□ 0.52
IFT20-202ENST00000357896 ERAP1Q9NZ08 941 aa18.31■□□□□ 0.52
IFT20-202ENST00000357896 TUBE1Q9UJT0 475 aa18.31■□□□□ 0.52
IFT20-202ENST00000357896 SUPT16HQ9Y5B9 1047 aaKnown RBP18.31■□□□□ 0.52
IFT20-202ENST00000357896 TTC3P53804 2025 aa18.31■□□□□ 0.52
IFT20-202ENST00000357896 FRMPD4Q14CM0 1322 aa18.3■□□□□ 0.52
IFT20-202ENST00000357896 GLP2RO95838 553 aa18.3■□□□□ 0.52
IFT20-202ENST00000357896 SP4Q02446 784 aa18.3■□□□□ 0.52
IFT20-202ENST00000357896 UBE3AQ05086 875 aa18.3■□□□□ 0.52
IFT20-202ENST00000357896 SEMA3FQ13275 785 aa18.3■□□□□ 0.52
IFT20-202ENST00000357896 PTPN21Q16825 1174 aa18.3■□□□□ 0.52
IFT20-202ENST00000357896 IER5Q5VY09 327 aa18.3■□□□□ 0.52
IFT20-202ENST00000357896 DNAJB3Q8WWF6 145 aa18.3■□□□□ 0.52
IFT20-202ENST00000357896 RILPL2Q969X0 211 aa18.3■□□□□ 0.52
IFT20-202ENST00000357896 PIGSQ96S52 555 aa18.3■□□□□ 0.52
IFT20-202ENST00000357896 CDCA3Q99618 268 aaPredicted RBP18.3■□□□□ 0.52
IFT20-202ENST00000357896 CDY2AQ9Y6F7 541 aa18.3■□□□□ 0.52
IFT20-202ENST00000357896 PNMA6FA0A0J9YX94 578 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 MBLAC1A4D2B0 266 aaPredicted RBP18.29■□□□□ 0.52
IFT20-202ENST00000357896 PROB1E7EW31 1015 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 SRGAP2BP0DMP2 458 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 SDSP20132 328 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 CD52P31358 61 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 TCF7P36402 384 aaPredicted RBP18.29■□□□□ 0.52
IFT20-202ENST00000357896 MRPS6P82932 125 aaKnown RBP18.29■□□□□ 0.52
IFT20-202ENST00000357896 GRIK4Q16099 956 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 FAM43BQ6ZT52 329 aaPredicted RBP18.29■□□□□ 0.52
IFT20-202ENST00000357896 NLRX1Q86UT6 975 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 SUSD6Q92537 303 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 NEK1Q96PY6 1258 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 RIOX1Q9H6W3 641 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 AGO3Q9H9G7 860 aaKnown RBP18.29■□□□□ 0.52
IFT20-202ENST00000357896 PCDHB12Q9Y5F1 795 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 MYO15AQ9UKN7 3530 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 KMT2EQ8IZD2 1858 aa18.29■□□□□ 0.52
IFT20-202ENST00000357896 CACNA1HO95180 2353 aa18.28■□□□□ 0.52
IFT20-202ENST00000357896 H0Y858 1186 aa18.28■□□□□ 0.52
IFT20-202ENST00000357896 PAN2Q504Q3 1202 aaKnown RBP18.28■□□□□ 0.52
IFT20-202ENST00000357896 PCNX4Q63HM2 1172 aa18.28■□□□□ 0.52
IFT20-202ENST00000357896 PDE12Q6L8Q7 609 aaKnown RBP18.28■□□□□ 0.52
IFT20-202ENST00000357896 ZBTB33Q86T24 672 aa18.28■□□□□ 0.52
IFT20-202ENST00000357896 RTN4RL1Q86UN2 441 aaPredicted RBP18.28■□□□□ 0.52
IFT20-202ENST00000357896 ATP8B4Q8TF62 1192 aa18.28■□□□□ 0.52
IFT20-202ENST00000357896 LINC01599Q8WXQ3 324 aa18.28■□□□□ 0.52
IFT20-202ENST00000357896 CDHR1Q96JP9 859 aa18.28■□□□□ 0.52
IFT20-202ENST00000357896 TLR9Q9NR96 1032 aa18.28■□□□□ 0.52
IFT20-202ENST00000357896 AAASQ9NRG9 546 aa18.28■□□□□ 0.52
IFT20-202ENST00000357896 RNF216Q9NWF9 866 aaPredicted RBP18.28■□□□□ 0.52
IFT20-202ENST00000357896 LRFN2Q9ULH4 789 aa18.28■□□□□ 0.52
IFT20-202ENST00000357896 RRN3P2A6NIE6 340 aa18.27■□□□□ 0.52
IFT20-202ENST00000357896 M0QZ92 97 aa18.27■□□□□ 0.52
IFT20-202ENST00000357896 PPFIA3O75145 1194 aa18.27■□□□□ 0.52
IFT20-202ENST00000357896 SCG2P13521 617 aa18.27■□□□□ 0.52
IFT20-202ENST00000357896 MARCH8Q5T0T0 291 aa18.27■□□□□ 0.52
IFT20-202ENST00000357896 SEPT1Q8WYJ6 367 aa18.27■□□□□ 0.52
IFT20-202ENST00000357896 GLG1Q92896 1179 aa18.27■□□□□ 0.52
IFT20-202ENST00000357896 TNPO1Q92973 898 aaKnown RBP18.27■□□□□ 0.52
IFT20-202ENST00000357896 RIPOR3Q96MK2 946 aa18.27■□□□□ 0.52
IFT20-202ENST00000357896 DSCC1Q9BVC3 393 aa18.27■□□□□ 0.52
IFT20-202ENST00000357896 SMARCAD1Q9H4L7 1026 aa18.27■□□□□ 0.52
IFT20-202ENST00000357896 TELO2Q9Y4R8 837 aa18.27■□□□□ 0.52
IFT20-202ENST00000357896 PER2O15055 1255 aa18.26■□□□□ 0.51
IFT20-202ENST00000357896 GALR2O43603 387 aaPredicted RBP18.26■□□□□ 0.51
IFT20-202ENST00000357896 PAK2Q13177 524 aa18.26■□□□□ 0.51
IFT20-202ENST00000357896 SEC23AQ15436 765 aa18.26■□□□□ 0.51
IFT20-202ENST00000357896 CWC27Q6UX04 472 aaKnown RBP18.26■□□□□ 0.51
IFT20-202ENST00000357896 CUL5Q93034 780 aa18.26■□□□□ 0.51
IFT20-202ENST00000357896 PADI3Q9ULW8 664 aa18.26■□□□□ 0.51
IFT20-202ENST00000357896 KAT6AQ92794 2004 aa18.26■□□□□ 0.51
IFT20-202ENST00000357896 MARK3P27448 753 aa18.25■□□□□ 0.51
IFT20-202ENST00000357896 GRM4Q14833 912 aa18.25■□□□□ 0.51
IFT20-202ENST00000357896 DUSP6Q16828 381 aa18.25■□□□□ 0.51
IFT20-202ENST00000357896 SPOUT1Q5T280 376 aaKnown RBP18.25■□□□□ 0.51
IFT20-202ENST00000357896 TMEM184AQ6ZMB5 413 aa18.25■□□□□ 0.51
IFT20-202ENST00000357896 UBALD2Q8IYN6 164 aa18.25■□□□□ 0.51
IFT20-202ENST00000357896 SMARCC2Q8TAQ2 1214 aa18.25■□□□□ 0.51
IFT20-202ENST00000357896 FAM49AQ9H0Q0 323 aaPredicted RBP18.25■□□□□ 0.51
IFT20-202ENST00000357896 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
IFT20-202ENST00000357896 PCDHB7Q9Y5E2 793 aa18.25■□□□□ 0.51
IFT20-202ENST00000357896 PCDHGC5Q9Y5F6 944 aa18.25■□□□□ 0.51
IFT20-202ENST00000357896 SPTBN4Q9H254 2564 aa18.25■□□□□ 0.51
IFT20-202ENST00000357896 LAMA4Q16363 1823 aa18.24■□□□□ 0.51
IFT20-202ENST00000357896 GSTTP1A0A1W2PQM5 241 aa18.24■□□□□ 0.51
IFT20-202ENST00000357896 HIP1O00291 1037 aa18.24■□□□□ 0.51
IFT20-202ENST00000357896 IGBP1P78318 339 aa18.24■□□□□ 0.51
IFT20-202ENST00000357896 SLC35G1Q2M3R5 365 aa18.24■□□□□ 0.51
IFT20-202ENST00000357896 ERMP1Q7Z2K6 904 aa18.24■□□□□ 0.51
IFT20-202ENST00000357896 GPRASP2Q96D09 838 aa18.24■□□□□ 0.51
IFT20-202ENST00000357896 NR2E1Q9Y466 385 aa18.24■□□□□ 0.51
IFT20-202ENST00000357896 TRPV2Q9Y5S1 764 aa18.24■□□□□ 0.51
IFT20-202ENST00000357896 PTPRZ1P23471 2315 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms