RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 GABBR1Q9UBS5 961 aa28.5■■■□□ 2.15
SSBP3-202ENST00000357475 A0A1W2PQ27 194 aa28.49■■■□□ 2.15
SSBP3-202ENST00000357475 A0A1W2PQ64 194 aa28.49■■■□□ 2.15
SSBP3-202ENST00000357475 A0A1W2PQD8 194 aa28.49■■■□□ 2.15
SSBP3-202ENST00000357475 PSAPP07602 524 aa28.49■■■□□ 2.15
SSBP3-202ENST00000357475 ZNF286BP0CG31 522 aa28.49■■■□□ 2.15
SSBP3-202ENST00000357475 CMA1P23946 247 aa28.49■■■□□ 2.15
SSBP3-202ENST00000357475 CCT6AP40227 531 aaKnown RBP28.49■■■□□ 2.15
SSBP3-202ENST00000357475 FSIP1Q8NA03 581 aa28.49■■■□□ 2.15
SSBP3-202ENST00000357475 RDM1Q8NG50 284 aa28.49■■■□□ 2.15
SSBP3-202ENST00000357475 DEFB118Q96PH6 123 aa28.49■■■□□ 2.15
SSBP3-202ENST00000357475 MYCNP04198 464 aaPredicted RBP28.48■■■□□ 2.15
SSBP3-202ENST00000357475 HOXD8P13378 290 aaPredicted RBP28.48■■■□□ 2.15
SSBP3-202ENST00000357475 PFKFB1P16118 471 aa28.48■■■□□ 2.15
SSBP3-202ENST00000357475 UBA7P41226 1012 aa28.48■■■□□ 2.15
SSBP3-202ENST00000357475 GRB10Q13322 594 aa28.48■■■□□ 2.15
SSBP3-202ENST00000357475 KRT79Q5XKE5 535 aa28.48■■■□□ 2.15
SSBP3-202ENST00000357475 CCSER1Q9C0I3 900 aa28.48■■■□□ 2.15
SSBP3-202ENST00000357475 BACH1O14867 736 aa28.48■■■□□ 2.15
SSBP3-202ENST00000357475 ZNF862O60290 1169 aa28.48■■■□□ 2.15
SSBP3-202ENST00000357475 LGR5O75473 907 aa28.48■■■□□ 2.15
SSBP3-202ENST00000357475 POTEGQ6S5H5 508 aa28.48■■■□□ 2.15
SSBP3-202ENST00000357475 TPH2Q8IWU9 490 aa28.48■■■□□ 2.15
SSBP3-202ENST00000357475 LXNQ9BS40 222 aa28.48■■■□□ 2.15
SSBP3-202ENST00000357475 GOLGA6L4A6NEF3 574 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 ZBTB39O15060 712 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 MSCO60682 206 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 LGALS2P05162 132 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 P4HBP07237 508 aaKnown RBP28.47■■■□□ 2.15
SSBP3-202ENST00000357475 ATP4AP20648 1035 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 RPA1P27694 616 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 NDUFA8P51970 172 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 NKX3-2P78367 333 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 TRMT1LQ7Z2T5 733 aaKnown RBP28.47■■■□□ 2.15
SSBP3-202ENST00000357475 KCNK18Q7Z418 384 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 PDILTQ8N807 584 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 KLHDC9Q8NEP7 349 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 ERMNQ8TAM6 284 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 MRPS27Q92552 414 aaKnown RBP28.47■■■□□ 2.15
SSBP3-202ENST00000357475 C16orf70Q9BSU1 422 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 POLR3CQ9BUI4 534 aaPredicted RBP28.47■■■□□ 2.15
SSBP3-202ENST00000357475 ZNF302Q9NR11 478 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 HPSEQ9Y251 543 aa28.47■■■□□ 2.15
SSBP3-202ENST00000357475 IGSF9BQ9UPX0 1349 aa28.46■■■□□ 2.15
SSBP3-202ENST00000357475 LIG1P18858 919 aa28.46■■■□□ 2.15
SSBP3-202ENST00000357475 CPT1AP50416 773 aa28.46■■■□□ 2.15
SSBP3-202ENST00000357475 UBE2HP62256 183 aa28.46■■■□□ 2.15
SSBP3-202ENST00000357475 GNASQ5JWF2 1037 aa28.46■■■□□ 2.15
SSBP3-202ENST00000357475 MAFBQ9Y5Q3 323 aaPredicted RBP28.46■■■□□ 2.15
SSBP3-202ENST00000357475 EMSYQ7Z589 1322 aa28.46■■■□□ 2.15
SSBP3-202ENST00000357475 DNAH12Q6ZR08 3092 aa28.45■■■□□ 2.15
SSBP3-202ENST00000357475 TMEM150BA6NC51 233 aa28.45■■■□□ 2.15
SSBP3-202ENST00000357475 PPFIA4O75335 1185 aa28.45■■■□□ 2.15
SSBP3-202ENST00000357475 MYL3P08590 195 aa28.45■■■□□ 2.15
SSBP3-202ENST00000357475 QARSP47897 775 aaKnown RBP28.45■■■□□ 2.15
SSBP3-202ENST00000357475 PSMC6P62333 389 aa28.45■■■□□ 2.15
SSBP3-202ENST00000357475 LRRC41Q15345 812 aa28.45■■■□□ 2.15
SSBP3-202ENST00000357475 DGKDQ16760 1214 aa28.45■■■□□ 2.15
SSBP3-202ENST00000357475 HAUS3Q68CZ6 603 aa28.45■■■□□ 2.15
SSBP3-202ENST00000357475 CCSAPQ6IQ19 270 aaPredicted RBP28.45■■■□□ 2.15
SSBP3-202ENST00000357475 PPP1R13LQ8WUF5 828 aa28.45■■■□□ 2.15
SSBP3-202ENST00000357475 TUFT1Q9NNX1 390 aa28.45■■■□□ 2.15
SSBP3-202ENST00000357475 KIAA1024Q9UPX6 916 aa28.45■■■□□ 2.15
SSBP3-202ENST00000357475 FAM237AA0A1B0GTK4 181 aa28.44■■■□□ 2.14
SSBP3-202ENST00000357475 STBD1O95210 358 aa28.44■■■□□ 2.14
SSBP3-202ENST00000357475 PLCG1P19174 1290 aa28.44■■■□□ 2.14
SSBP3-202ENST00000357475 MARK3P27448 753 aa28.44■■■□□ 2.14
SSBP3-202ENST00000357475 STAT5BP51692 787 aa28.44■■■□□ 2.14
SSBP3-202ENST00000357475 TMEM119Q4V9L6 283 aa28.44■■■□□ 2.14
SSBP3-202ENST00000357475 AFAP1L1Q8TED9 768 aa28.44■■■□□ 2.14
SSBP3-202ENST00000357475 GLG1Q92896 1179 aa28.44■■■□□ 2.14
SSBP3-202ENST00000357475 DDX19AQ9NUU7 478 aaKnown RBP28.44■■■□□ 2.14
SSBP3-202ENST00000357475 FAM13BQ9NYF5 915 aa28.44■■■□□ 2.14
SSBP3-202ENST00000357475 GOLGA6L22H0YM25 854 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 PSMC5P62195 406 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 HYIQ5T013 277 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 PDXDC2PQ6P474 469 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 NEK9Q8TD19 979 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 KAT2BQ92831 832 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 SPC25Q9HBM1 224 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 KCNH3Q9ULD8 1083 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 ARID2Q68CP9 1835 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 POLR2DO15514 142 aaKnown RBP28.43■■■□□ 2.14
SSBP3-202ENST00000357475 KCNA10Q16322 511 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 NAALADL2Q58DX5 795 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 RASSF8Q8NHQ8 419 aa28.43■■■□□ 2.14
SSBP3-202ENST00000357475 CST5P28325 142 aaPredicted RBP28.42■■■□□ 2.14
SSBP3-202ENST00000357475 TXLNAP40222 546 aa28.42■■■□□ 2.14
SSBP3-202ENST00000357475 PURAQ00577 322 aaKnown RBP28.42■■■□□ 2.14
SSBP3-202ENST00000357475 PRKCEQ02156 737 aa28.42■■■□□ 2.14
SSBP3-202ENST00000357475 FAM160B1Q5W0V3 765 aa28.42■■■□□ 2.14
SSBP3-202ENST00000357475 CXCL17Q6UXB2 119 aa28.42■■■□□ 2.14
SSBP3-202ENST00000357475 PIGOQ8TEQ8 1089 aa28.42■■■□□ 2.14
SSBP3-202ENST00000357475 DHX58Q96C10 678 aa28.42■■■□□ 2.14
SSBP3-202ENST00000357475 CALML4Q96GE6 196 aa28.42■■■□□ 2.14
SSBP3-202ENST00000357475 SH2D3AQ9BRG2 576 aa28.42■■■□□ 2.14
SSBP3-202ENST00000357475 AZI2Q9H6S1 392 aa28.42■■■□□ 2.14
SSBP3-202ENST00000357475 ZSWIM4Q9H7M6 989 aa28.42■■■□□ 2.14
SSBP3-202ENST00000357475 E9PMD0 336 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 SNW1Q13573 536 aaKnown RBP28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms