RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 MRPL46Q9H2W6 279 aaKnown RBP5.96□□□□□ -1.45
PTPRD-202ENST00000356435 MOCS3O95396 460 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 HSPA6P17066 643 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 IL6STP40189 918 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-202ENST00000356435 PAPOLAP51003 745 aaKnown RBP5.96□□□□□ -1.45
PTPRD-202ENST00000356435 ICE2Q659A1 982 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 LRRC31Q6UY01 552 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 ANKS3Q6ZW76 656 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 FAM186BQ8IYM0 893 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 TBC1D19Q8N5T2 526 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 DCAF4Q8WV16 495 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 ALKBH8Q96BT7 664 aaKnown RBP5.96□□□□□ -1.45
PTPRD-202ENST00000356435 KCNF1Q9H3M0 494 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 MED4Q9NPJ6 270 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 KRT82Q9NSB4 513 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 SLC4A7Q9Y6M7 1214 aa5.96□□□□□ -1.45
PTPRD-202ENST00000356435 RASGRF2O14827 1237 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 LUC7L3O95232 432 aaKnown RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 TCP1P17987 556 aaKnown RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 SEPT2Q15019 361 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 MTERF2Q49AM1 385 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 ERFEQ4G0M1 354 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 EFHBQ8N7U6 833 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 PDCD7Q8N8D1 485 aaKnown RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 ENOX1Q8TC92 643 aaKnown RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 CFAP36Q96G28 342 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 BPIFA3Q9BQP9 254 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 EIF2AQ9BY44 585 aaKnown RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 DPH5Q9H2P9 285 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 TMEM94Q12767 1356 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 SNX2O60749 519 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 RAD17O75943 681 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 DDX5P17844 614 aaKnown RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 WASHC5Q12768 1159 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 TTC19Q6DKK2 380 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 OTUD7AQ8TE49 926 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 STAMQ92783 540 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 KCNB2Q92953 911 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 MASTLQ96GX5 879 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 SCINQ9Y6U3 715 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 PNMA6AP0CW24 399 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 TAF1BQ53T94 588 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 HP1BP3Q5SSJ5 553 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF467Q7Z7K2 595 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 SCHIP1Q9P0W5 487 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 GCNT4Q9P109 453 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 MYL1P05976 194 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 ARHGDIAP52565 204 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 MXD4Q14582 209 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 ZSCAN26Q16670 478 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 MTRQ99707 1265 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 ABCA9Q8IUA7 1624 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 IQCA1LA6NCM1 817 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 SGO2Q562F6 1265 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 CXorf38Q8TB03 319 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 SCG3Q8WXD2 468 aaKnown RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 NCLNQ969V3 563 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 DHTKD1Q96HY7 919 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 CNOT6LQ96LI5 555 aaKnown RBP5.96□□□□□ -1.46
PTPRD-202ENST00000356435 DYRK4Q9NR20 520 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 PI4KBQ9UBF8 816 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 PPP1R9AQ9ULJ8 1098 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 PTPN22Q9Y2R2 807 aa5.96□□□□□ -1.46
PTPRD-202ENST00000356435 ANKARQ7Z5J8 1434 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 HMGB3O15347 200 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 HIP1RO75146 1068 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF189O75820 626 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 BAG2O95816 211 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 EEF1GP26641 437 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 SCARA5Q6ZMJ2 495 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 SZRD1Q7Z422 152 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 APOBEC3FQ8IUX4 373 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 TEKT4Q8WW24 435 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 SH3KBP1Q96B97 665 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 IFT43Q96FT9 208 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 FSD1LQ9BXM9 530 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF341Q9BYN7 854 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 HAUS4Q9H6D7 363 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 ATF5Q9Y2D1 282 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 MYOM1P52179 1685 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 MYO1CO00159 1063 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 IKBKBO14920 756 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 CARD6Q9BX69 1037 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 TRPV6Q9H1D0 765 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 ZSWIM6Q9HCJ5 1215 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 XAB2Q9HCS7 855 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 SUN2Q9UH99 717 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 SERPINB13Q9UIV8 391 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 PALD1Q9ULE6 856 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 PACSIN2Q9UNF0 486 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 JRKLQ9Y4A0 524 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 BASP1P80723 227 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 HSP90AA5PQ58FG0 334 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 ATG16L1Q676U5 607 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 KRT39Q6A163 491 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 RNF207Q6ZRF8 634 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 TADA2BQ86TJ2 420 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 TTC30BQ8N4P2 665 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 PPWD1Q96BP3 646 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 TRIM62Q9BVG3 475 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms