RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 ZSCAN20P17040 1043 aaPredicted RBP17.29■□□□□ 0.36
RXRA-201ENST00000356384 KRT27Q7Z3Y8 459 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 NCLNQ969V3 563 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 THOC1Q96FV9 657 aaKnown RBP17.29■□□□□ 0.36
RXRA-201ENST00000356384 GREM2Q9H772 168 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 MID2Q9UJV3 735 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 KRT33BQ14525 404 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 MTERF2Q49AM1 385 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 PPP1R2P3Q6NXS1 205 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 FMO2Q99518 471 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 RNF26Q9BY78 433 aaPredicted RBP17.29■□□□□ 0.36
RXRA-201ENST00000356384 PARD6BQ9BYG5 372 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 WDR11Q9BZH6 1224 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 PCDHA13Q9Y5I0 950 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 IQANK1A0A1B0GTG1 560 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 WDR64B1ANS9 1081 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 IKBKBO14920 756 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 TTLL1O95922 423 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 ZNF18P17022 549 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 KCNQ4P56696 695 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 PIGSQ96S52 555 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 ZWILCHQ9H900 591 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 PCCAP05165 728 aaPredicted RBP17.28■□□□□ 0.36
RXRA-201ENST00000356384 CDC25AP30304 524 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 APOA5Q6Q788 366 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 HSPH1Q92598 858 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.28■□□□□ 0.36
RXRA-201ENST00000356384 SAMSN1Q9NSI8 373 aaKnown RBP17.28■□□□□ 0.36
RXRA-201ENST00000356384 GDF11O95390 407 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 ACSL3O95573 720 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 HSPA4LO95757 839 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 MYO1EQ12965 1108 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 CDO1Q16878 200 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 RNF139Q8WU17 664 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 TEKT2Q9UIF3 430 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 SERPING1P05155 500 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 CCNA1P78396 465 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 LSG1Q9H089 658 aaKnown RBP17.28■□□□□ 0.36
RXRA-201ENST00000356384 GNL1P36915 607 aaPredicted RBP17.28■□□□□ 0.36
RXRA-201ENST00000356384 MXI1P50539 228 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 TRIM15Q9C019 465 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 USPL1Q5W0Q7 1092 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 ACTR5Q9H9F9 607 aaPredicted RBP17.28■□□□□ 0.36
RXRA-201ENST00000356384 EMILIN3Q9NT22 766 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 HACD3Q9P035 362 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 RNF14Q9UBS8 474 aa17.28■□□□□ 0.36
RXRA-201ENST00000356384 ABCC4O15439 1325 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 TADA3O75528 432 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 MKRN3Q13064 507 aaKnown RBP17.27■□□□□ 0.36
RXRA-201ENST00000356384 CENPUQ71F23 418 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 SZRD1Q7Z422 152 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 TBC1D1Q86TI0 1168 aaPredicted RBP17.27■□□□□ 0.36
RXRA-201ENST00000356384 GAS2L3Q86XJ1 694 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 ZMAT2Q96NC0 199 aaKnown RBP17.27■□□□□ 0.36
RXRA-201ENST00000356384 POLR3EQ9NVU0 708 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 ZMYM4Q5VZL5 1548 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 ANXA13P27216 316 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 PDIK1LQ8N165 341 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 PRPF38AQ8NAV1 312 aaKnown RBP17.27■□□□□ 0.36
RXRA-201ENST00000356384 COA7Q96BR5 231 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 PUS3Q9BZE2 481 aaKnown RBP17.27■□□□□ 0.36
RXRA-201ENST00000356384 KIAA0232Q92628 1395 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 ATP8B3O60423 1300 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 M0R2C6 588 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 SEMA3EO15041 775 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 MAPK13O15264 365 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 DYNLL1P63167 89 aaKnown RBP17.27■□□□□ 0.36
RXRA-201ENST00000356384 NUGGCQ68CJ6 796 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 EEPD1Q7L9B9 569 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 ST13P4Q8IZP2 240 aaPredicted RBP17.27■□□□□ 0.36
RXRA-201ENST00000356384 MTRQ99707 1265 aa17.27■□□□□ 0.36
RXRA-201ENST00000356384 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.35
RXRA-201ENST00000356384 CCND2P30279 289 aa17.27■□□□□ 0.35
RXRA-201ENST00000356384 CYP27A1Q02318 531 aa17.27■□□□□ 0.35
RXRA-201ENST00000356384 RWDD2AQ9UIY3 292 aa17.27■□□□□ 0.35
RXRA-201ENST00000356384 A0A0G2JND7 137 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 PI4K2BG5E9Z4 385 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 NSUN2Q08J23 767 aaKnown RBP eCLIP17.26■□□□□ 0.35
RXRA-201ENST00000356384 SRRM1Q8IYB3 904 aaKnown RBP17.26■□□□□ 0.35
RXRA-201ENST00000356384 GANCQ8TET4 914 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 N4BP2L2Q92802 583 aaPredicted RBP17.26■□□□□ 0.35
RXRA-201ENST00000356384 FTOQ9C0B1 505 aaKnown RBP eCLIP17.26■□□□□ 0.35
RXRA-201ENST00000356384 UBN2Q6ZU65 1347 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 GOLGA8IPA6NC78 632 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 GOLGA8JA6NMD2 632 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 HDLBPQ00341 1268 aaKnown RBP17.26■□□□□ 0.35
RXRA-201ENST00000356384 TBCCQ15814 346 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 TTC25Q96NG3 672 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 GCFC2P16383 781 aaKnown RBP17.26■□□□□ 0.35
RXRA-201ENST00000356384 RWDD4Q6NW29 188 aaKnown RBP17.26■□□□□ 0.35
RXRA-201ENST00000356384 CRLF3Q8IUI8 442 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 TTC17Q96AE7 1141 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 ZBTB18Q99592 522 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 ADD3Q9UEY8 706 aaKnown RBP17.26■□□□□ 0.35
RXRA-201ENST00000356384 SUN2Q9UH99 717 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 TRPC5Q9UL62 973 aaPredicted RBP17.26■□□□□ 0.35
RXRA-201ENST00000356384 PDE8BO95263 885 aa17.26■□□□□ 0.35
RXRA-201ENST00000356384 SLFN14P0C7P3 912 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms