RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SRP68Q9UHB9 627 aaKnown RBP11.09□□□□□ -0.63
PTPRA-203ENST00000356147 ITGB4P16144 1822 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 PVALEFA0A1B0GWK0 134 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 RBAK-RBAKDNI3L0D1 243 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 TRAPPC3O43617 180 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 PPP1R12BO60237 982 aaPredicted RBP11.09□□□□□ -0.63
PTPRA-203ENST00000356147 TBC1D9BQ66K14 1250 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 ALKBH5Q6P6C2 394 aaKnown RBP11.09□□□□□ -0.63
PTPRA-203ENST00000356147 PEX26Q7Z412 305 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 CD302Q8IX05 232 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 FUKQ8N0W3 1084 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 OSGEPQ9NPF4 335 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 LUC7LQ9NQ29 371 aaKnown RBP11.09□□□□□ -0.63
PTPRA-203ENST00000356147 CHORDC1Q9UHD1 332 aaPredicted RBP11.09□□□□□ -0.63
PTPRA-203ENST00000356147 TPX2Q9ULW0 747 aaKnown RBP11.09□□□□□ -0.63
PTPRA-203ENST00000356147 SUFUQ9UMX1 484 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 CAND2O75155 1236 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 NR2F2P24468 414 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 PPP1R2P41236 205 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 SLCO1A2P46721 670 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 CDK8P49336 464 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 PPP2R2AP63151 447 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 ZCWPW2Q504Y3 356 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 ANKRD20A8PQ5CZ79 823 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 GALNT17Q6IS24 598 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 AADACL2Q6P093 401 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 DAAM2Q86T65 1068 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 TRIM59Q8IWR1 403 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 RBM46Q8TBY0 533 aaKnown RBP11.08□□□□□ -0.64
PTPRA-203ENST00000356147 SCFD1Q8WVM8 642 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 GLG1Q92896 1179 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 MTFR1LQ9H019 292 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 ANKIB1Q9P2G1 1089 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 RNF14Q9UBS8 474 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 ODF2LQ9ULJ1 636 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 NHSL1Q5SYE7 1610 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 IFNAR2P48551 515 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 TTBK2Q6IQ55 1244 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 GPBP1Q86WP2 473 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 PARP9Q8IXQ6 854 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 CACNA2D3Q8IZS8 1091 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 U2AF1L4Q8WU68 220 aaKnown RBP11.08□□□□□ -0.64
PTPRA-203ENST00000356147 STK17AQ9UEE5 414 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 BAIAP2L1Q9UHR4 511 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 MYH1P12882 1939 aa11.08□□□□□ -0.64
PTPRA-203ENST00000356147 PGRMC1O00264 195 aaKnown RBP11.07□□□□□ -0.64
PTPRA-203ENST00000356147 CTNND1O60716 968 aaKnown RBP11.07□□□□□ -0.64
PTPRA-203ENST00000356147 PDE6BP35913 854 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 SCTRP47872 440 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 USP11P51784 963 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 PPP4R3AQ6IN85 833 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 SLC30A10Q6XR72 485 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 ARFGAP2Q8N6H7 521 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 SCFD2Q8WU76 684 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 CCDC113Q9H0I3 377 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 GANQ9H2C0 597 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 NAGPAQ9UK23 515 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 TMEM59LQ9UK28 342 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 POTEFA5A3E0 1075 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 A6NNZ2 444 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 CLIC2O15247 247 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 FGGP02679 453 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 MYBP10242 640 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 CDC25CP30307 473 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 PICALMQ13492 652 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 SNCBQ16143 134 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 TUBB8Q3ZCM7 444 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 POTEGQ6S5H5 508 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 POTEEQ6S8J3 1075 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 IRF2BP2Q7Z5L9 587 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 HAS1Q92839 578 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 IQCDQ96DY2 449 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 SEPT11Q9NVA2 429 aaKnown RBP11.07□□□□□ -0.64
PTPRA-203ENST00000356147 DDX25Q9UHL0 483 aaKnown RBP11.07□□□□□ -0.64
PTPRA-203ENST00000356147 HDAC9Q9UKV0 1011 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 SFI1A8K8P3 1242 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 GFPT2O94808 682 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 UCHL3P15374 230 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 NF2P35240 595 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 CASP4P49662 377 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 ADCY7P51828 1080 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 KCNA1Q09470 495 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 PPP1R7Q15435 360 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 CCDC38Q502W7 563 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 HIBCHQ6NVY1 386 aaPredicted RBP11.07□□□□□ -0.64
PTPRA-203ENST00000356147 SPATS2Q86XZ4 545 aaKnown RBP11.07□□□□□ -0.64
PTPRA-203ENST00000356147 TCP11Q8WWU5 503 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 LRRC45Q96CN5 670 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 HVCN1Q96D96 273 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 SPZ1Q9BXG8 430 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 RIC8AQ9NPQ8 531 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.07□□□□□ -0.643e-6■■■■■ 73.9
PTPRA-203ENST00000356147 PCDHA12Q9UN75 941 aa11.07□□□□□ -0.64
PTPRA-203ENST00000356147 MYH4Q9Y623 1939 aa11.06□□□□□ -0.64
PTPRA-203ENST00000356147 USP17L15C9J2P7 530 aa11.06□□□□□ -0.64
PTPRA-203ENST00000356147 USP17L13C9JLJ4 530 aa11.06□□□□□ -0.64
PTPRA-203ENST00000356147 USP17L11C9JVI0 530 aa11.06□□□□□ -0.64
PTPRA-203ENST00000356147 USP17L18D6R9N7 530 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms