RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 ATP6V0A1Q93050 837 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 PAWRQ96IZ0 340 aaKnown RBP17.47■□□□□ 0.39
TRIM13-201ENST00000356017 AK8Q96MA6 479 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 SENP6Q9GZR1 1112 aaPredicted RBP17.47■□□□□ 0.39
TRIM13-201ENST00000356017 C11orf49Q9H6J7 331 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 LRWD1Q9UFC0 647 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 VWA3AA6NCI4 1184 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 POTEMA6NI47 508 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 EML1O00423 815 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 SPTLC2O15270 562 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 PPP6R2O75170 966 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 COL6A1P12109 1028 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 NCLP19338 710 aaKnown RBP17.47■□□□□ 0.39
TRIM13-201ENST00000356017 HAUS3Q68CZ6 603 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 CCDC60Q8IWA6 550 aaPredicted RBP17.47■□□□□ 0.39
TRIM13-201ENST00000356017 NEK9Q8TD19 979 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 KAT2BQ92831 832 aa17.47■□□□□ 0.39
TRIM13-201ENST00000356017 SCAND2PQ9GZW5 306 aaPredicted RBP17.47■□□□□ 0.39
TRIM13-201ENST00000356017 SRPRBQ9Y5M8 271 aaKnown RBP17.47■□□□□ 0.39
TRIM13-201ENST00000356017 MAFBQ9Y5Q3 323 aaPredicted RBP17.47■□□□□ 0.39
TRIM13-201ENST00000356017 P4HBP07237 508 aaKnown RBP17.46■□□□□ 0.39
TRIM13-201ENST00000356017 MARCKSP29966 332 aaPredicted RBP17.46■□□□□ 0.39
TRIM13-201ENST00000356017 LONP1P36776 959 aaKnown RBP17.46■□□□□ 0.39
TRIM13-201ENST00000356017 IL17AQ16552 155 aa17.46■□□□□ 0.39
TRIM13-201ENST00000356017 KIAA0753Q2KHM9 967 aa17.46■□□□□ 0.39
TRIM13-201ENST00000356017 PDXDC2PQ6P474 469 aa17.46■□□□□ 0.39
TRIM13-201ENST00000356017 KRI1Q8N9T8 703 aaKnown RBP17.46■□□□□ 0.39
TRIM13-201ENST00000356017 DIS3LQ8TF46 1054 aaKnown RBP17.46■□□□□ 0.39
TRIM13-201ENST00000356017 PCYT2Q99447 389 aa17.46■□□□□ 0.39
TRIM13-201ENST00000356017 GABBR1Q9UBS5 961 aa17.46■□□□□ 0.39
TRIM13-201ENST00000356017 A0A0U1RQG5 324 aaPredicted RBP17.45■□□□□ 0.38
TRIM13-201ENST00000356017 HAS3O00219 553 aa17.45■□□□□ 0.38
TRIM13-201ENST00000356017 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
TRIM13-201ENST00000356017 PSEN2P49810 448 aa17.45■□□□□ 0.38
TRIM13-201ENST00000356017 PSMC5P62195 406 aa17.45■□□□□ 0.38
TRIM13-201ENST00000356017 ITGA7Q13683 1181 aa17.45■□□□□ 0.38
TRIM13-201ENST00000356017 MFSD10Q14728 455 aa17.45■□□□□ 0.38
TRIM13-201ENST00000356017 TRIM50Q86XT4 487 aa17.45■□□□□ 0.38
TRIM13-201ENST00000356017 HSD17B14Q9BPX1 270 aa17.45■□□□□ 0.38
TRIM13-201ENST00000356017 EIF2AK1Q9BQI3 630 aaKnown RBP17.45■□□□□ 0.38
TRIM13-201ENST00000356017 RCOR1Q9UKL0 485 aa17.45■□□□□ 0.38
TRIM13-201ENST00000356017 KIAA0100Q14667 2235 aaKnown RBP17.45■□□□□ 0.38
TRIM13-201ENST00000356017 KRT79Q5XKE5 535 aa17.44■□□□□ 0.38
TRIM13-201ENST00000356017 NFRKBQ6P4R8 1299 aa17.44■□□□□ 0.38
TRIM13-201ENST00000356017 UBE2Q1Q7Z7E8 422 aa17.44■□□□□ 0.38
TRIM13-201ENST00000356017 CKAP2LQ8IYA6 745 aa17.44■□□□□ 0.38
TRIM13-201ENST00000356017 C7orf31Q8N865 590 aa17.44■□□□□ 0.38
TRIM13-201ENST00000356017 FAM167AQ96KS9 214 aa17.44■□□□□ 0.38
TRIM13-201ENST00000356017 SPATA32Q96LK8 384 aa17.44■□□□□ 0.38
TRIM13-201ENST00000356017 ZSWIM4Q9H7M6 989 aa17.44■□□□□ 0.38
TRIM13-201ENST00000356017 TUFT1Q9NNX1 390 aa17.44■□□□□ 0.38
TRIM13-201ENST00000356017 FBXO2Q9UK22 296 aaPredicted RBP17.44■□□□□ 0.38
TRIM13-201ENST00000356017 DOCK5Q9H7D0 1870 aa17.44■□□□□ 0.38
TRIM13-201ENST00000356017 IGSF9BQ9UPX0 1349 aa17.44■□□□□ 0.38
TRIM13-201ENST00000356017 MUTP22033 750 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 PSMC6P62333 389 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 PTPN11Q06124 597 aaPredicted RBP17.43■□□□□ 0.38
TRIM13-201ENST00000356017 NBPF20Q3BBV1 942 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 C1orf53Q5VUE5 145 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 SLC39A5Q6ZMH5 540 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 POLR3CQ9BUI4 534 aaPredicted RBP17.43■□□□□ 0.38
TRIM13-201ENST00000356017 POTEB3A0JP26 581 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 ARVCFO00192 962 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 SLITRK3O94933 977 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 MARK3P27448 753 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 RPA1P27694 616 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 CHMP4BP1P59074 171 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 POTEBQ6S5H4 581 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 SESTD1Q86VW0 696 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 TPH2Q8IWU9 490 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 C4orf19Q8IY42 314 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 BANK1Q8NDB2 785 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 ATP8B4Q8TF62 1192 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 BBXQ8WY36 941 aaPredicted RBP17.43■□□□□ 0.38
TRIM13-201ENST00000356017 DYDC2Q96IM9 177 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 LXNQ9BS40 222 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 RNPEPQ9H4A4 650 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 NRBP2Q9NSY0 501 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 RGL1Q9NZL6 768 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 MROH7Q68CQ1 1323 aa17.43■□□□□ 0.38
TRIM13-201ENST00000356017 SLC26A4O43511 780 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 HBP1O60381 514 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 LYPLA2O95372 231 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 GNAT1P11488 350 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 UBA7P41226 1012 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 ME1P48163 572 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 CYP4A11Q02928 519 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 PLCB4Q15147 1175 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 XKR3Q5GH77 459 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 CATSPER3Q86XQ3 398 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 KCTD17Q8N5Z5 321 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 ZNF579Q8NAF0 562 aaKnown RBP17.42■□□□□ 0.38
TRIM13-201ENST00000356017 SLC43A3Q8NBI5 491 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 SNX29Q8TEQ0 813 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 LEO1Q8WVC0 666 aaPredicted RBP17.42■□□□□ 0.38
TRIM13-201ENST00000356017 CSRNP2Q9H175 543 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 TRPC6Q9Y210 931 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 NRCAMQ92823 1304 aa17.42■□□□□ 0.38
TRIM13-201ENST00000356017 ZNF862O60290 1169 aa17.41■□□□□ 0.38
TRIM13-201ENST00000356017 CUTAO60888 179 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms