RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PRPF3O43395 683 aaKnown RBP13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 PTPREP23469 700 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 DARS2Q6PI48 645 aaKnown RBP13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 DEPDC1BQ8WUY9 529 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 IL17RAQ96F46 866 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 GOLPH3LQ9H4A5 285 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 GINM1Q9NU53 330 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 S100BP04271 92 aaPredicted RBP13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■□□□□ 9.9
SYNCRIP-201ENST00000355238 SNX5Q9Y5X3 404 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 DIAPH2O60879 1101 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 TMOD1P28289 359 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 ARL4CP56559 192 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 MRPS35P82673 323 aaKnown RBP13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 RNF207Q6ZRF8 634 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 TMEM206Q9H813 350 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 PALMDQ9NP74 551 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 A1BGP04217 495 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 TMEM191BP0C7N4 346 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 ATICP31939 592 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 AGGF1Q8N302 714 aaeCLIP13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 ACCSQ96QU6 501 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 DISC1Q9NRI5 854 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 ARHGAP31Q2M1Z3 1444 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 DDB1Q16531 1140 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 SIRT2Q8IXJ6 389 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 hCG_2014768A0A024R1R8 64 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 HSPA4LO95757 839 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 RARS2Q5T160 578 aaKnown RBP13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 DNAJC24Q6P3W2 148 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 MCUQ8NE86 351 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 WDR24Q96S15 920 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 TTC1Q99614 292 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 SMYD3Q9H7B4 428 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 TRIM33Q9UPN9 1127 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 M0R2C6 588 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 POLR2MP0CAP2 368 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 CHRNA3P32297 505 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 CA8P35219 290 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 LIFRP42702 1097 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 SPOPLQ6IQ16 392 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 NFRKBQ6P4R8 1299 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 TEX2Q8IWB9 1127 aa13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 UBE2TQ9NPD8 197 aaPredicted RBP13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 MRPL11Q9Y3B7 192 aaKnown RBP13.66□□□□□ -0.22
SYNCRIP-201ENST00000355238 KDM1AO60341 852 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 PLCG1P19174 1290 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 HSPA9P38646 679 aaKnown RBP13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 BYSLQ13895 437 aaKnown RBP13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 SPATA21Q7Z572 469 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 CFAP36Q96G28 342 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 ING2Q9H160 280 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 TFCP2L1Q9NZI6 479 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 CCDC22O60826 627 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 CCZ1BP86790 482 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 CCZ1P86791 482 aaPredicted RBP13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 TRPV6Q9H1D0 765 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 KIF21AQ7Z4S6 1674 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 KRT38O76015 456 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 HNRNPH1P31943 449 aaKnown RBP13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 NOP14P78316 857 aaKnown RBP13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 PABPC4Q13310 644 aaKnown RBP eCLIP13.65□□□□□ -0.225e-22■□□□□ 8.7
SYNCRIP-201ENST00000355238 CRYMQ14894 314 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 SPATA4Q8NEY3 305 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 TTLL11Q8NHH1 800 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 MLXIPQ9HAP2 919 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 NOC2LQ9Y3T9 749 aaKnown RBP13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 FRMPD2Q68DX3 1309 aaPredicted RBP13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 FBXO11Q86XK2 927 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 PROM2Q8N271 834 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 FBXL13Q8NEE6 735 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 TLR7Q9NYK1 1049 aaKnown RBP13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 TJP3O95049 919 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 E4F1Q66K89 784 aaPredicted RBP13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 ZDHHC9Q9Y397 364 aa13.65□□□□□ -0.22
SYNCRIP-201ENST00000355238 SYNMO15061 1565 aa13.65□□□□□ -0.23
SYNCRIP-201ENST00000355238 DNAJC6O75061 913 aa13.65□□□□□ -0.23
SYNCRIP-201ENST00000355238 SEMA3FQ13275 785 aa13.65□□□□□ -0.23
SYNCRIP-201ENST00000355238 ZNF496Q96IT1 587 aaPredicted RBP13.65□□□□□ -0.23
SYNCRIP-201ENST00000355238 NGLY1Q96IV0 654 aa13.65□□□□□ -0.23
SYNCRIP-201ENST00000355238 DNAJC17Q9NVM6 304 aaKnown RBP13.65□□□□□ -0.23
SYNCRIP-201ENST00000355238 NSMFQ6X4W1 530 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 ACAD11Q709F0 780 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 DCLK2Q8N568 766 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 FBXL5Q9UKA1 691 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 PTCH1Q13635 1447 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 SYCE1LA8MT33 242 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 AGTP01019 485 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 GOLGA8HP0CJ92 632 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 HDAC6Q9UBN7 1215 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 A0A1W2PQC6 194 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 ATP1A1P05023 1023 aaKnown RBP13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 ABCD1P33897 745 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 PI4K2BQ8TCG2 481 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 EHD2Q9NZN4 543 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 ESYT3A0FGR9 886 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 SYF2O95926 243 aaKnown RBP13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms