RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 POLR2FP61218 127 aaKnown RBP11.85□□□□□ -0.51
SND1-201ENST00000354725 IL17AQ16552 155 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 DACT2Q5SW24 774 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 EPSTI1Q96J88 318 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 TSC22D3Q99576 134 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 GBP3Q9H0R5 595 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 ABCF2Q9UG63 623 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 RNF225M0QZC1 329 aaPredicted RBP11.85□□□□□ -0.51
SND1-201ENST00000354725 M0R2N6 131 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 B3GALNT1O75752 331 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 SYF2O95926 243 aaKnown RBP11.85□□□□□ -0.51
SND1-201ENST00000354725 LINGO3P0C6S8 592 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 CUL3Q13618 768 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 ACCSLQ4AC99 568 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 SNX32Q86XE0 403 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 SLF2Q8IX21 1173 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 GALNT15Q8N3T1 639 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 ZNF384Q8TF68 577 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 SYMPKQ92797 1274 aaKnown RBP11.85□□□□□ -0.51
SND1-201ENST00000354725 EYA3Q99504 573 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 RNF41Q9H4P4 317 aaPredicted RBP11.85□□□□□ -0.51
SND1-201ENST00000354725 ZNF510Q9Y2H8 683 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.85□□□□□ -0.512e-9■■■■■ 29.8
SND1-201ENST00000354725 B4DLN1 442 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 FOSL1P15407 271 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 TBX4P57082 545 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 Q4G0T1 1027 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 CCDC170Q8IYT3 715 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 SYCP3Q8IZU3 236 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 CERS5Q8N5B7 392 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 IGSF22Q8N9C0 903 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 PNKPQ96T60 521 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 RWDD2AQ9UIY3 292 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 TNKSO95271 1327 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 RFX1P22670 979 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 GYG1P46976 350 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 BCAMP50895 628 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 CXCL9Q07325 125 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 DMPKQ09013 629 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 GNPTABQ3T906 1256 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 WDR93Q6P2C0 686 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 PODNQ7Z5L7 613 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 YTHDF3Q7Z739 585 aaKnown RBP11.84□□□□□ -0.51
SND1-201ENST00000354725 CNGA4Q8IV77 575 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 CCDC13Q8IYE1 715 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 CABP5Q9NP86 173 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 ABHD10Q9NUJ1 306 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 SEL1LQ9UBV2 794 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 SWAP70Q9UH65 585 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 REXO2Q9Y3B8 237 aaKnown RBP11.84□□□□□ -0.51
SND1-201ENST00000354725 SIPA1L1O43166 1804 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 PRSS47A8MTI9 375 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 PPIP5K2O43314 1243 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 RPL13P26373 211 aaKnown RBP11.84□□□□□ -0.51
SND1-201ENST00000354725 AARSP49588 968 aaKnown RBP eCLIP11.84□□□□□ -0.51
SND1-201ENST00000354725 ZNF131P52739 623 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 HDLBPQ00341 1268 aaKnown RBP11.84□□□□□ -0.51
SND1-201ENST00000354725 PTK7Q13308 1070 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 CYB5D1Q6P9G0 228 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 IRF2BP1Q8IU81 584 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 DCLK2Q8N568 766 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 EHD4Q9H223 541 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 RABEP2Q9H5N1 569 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 RNF181Q9P0P0 153 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 TTF2Q9UNY4 1162 aaKnown RBP11.84□□□□□ -0.51
SND1-201ENST00000354725 TRIM75PA6NK02 468 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 TRAPPC10P48553 1259 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 CHMP4BP1P59074 171 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 WASHC5Q12768 1159 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 OLFML1Q6UWY5 402 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 CCDC80Q76M96 950 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 CCDC65Q8IXS2 484 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 NSMCE1Q8WV22 266 aa11.84□□□□□ -0.51
SND1-201ENST00000354725 ZBED3Q96IU2 234 aaPredicted RBP11.84□□□□□ -0.51
SND1-201ENST00000354725 EIF3HO15372 352 aaKnown RBP eCLIP11.83□□□□□ -0.522e-8■■■□□ 16.8
SND1-201ENST00000354725 ABL1P00519 1130 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 KRT2P35908 639 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 SCNN1DP51172 638 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 IGBP1P78318 339 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 KIF4BQ2VIQ3 1234 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 TTC39BQ5VTQ0 682 aaPredicted RBP11.83□□□□□ -0.52
SND1-201ENST00000354725 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 TMTC3Q6ZXV5 915 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 LCA5Q86VQ0 697 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 ZNF507Q8TCN5 953 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 SLC35B4Q969S0 331 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 SLC39A3Q9BRY0 314 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 SLC4A4Q9Y6R1 1079 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 LRRIQ3A6PVS8 624 aaPredicted RBP11.83□□□□□ -0.52
SND1-201ENST00000354725 DDAH1O94760 285 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 STIP1P31948 543 aaKnown RBP11.83□□□□□ -0.52
SND1-201ENST00000354725 INHBCP55103 352 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 TRIM14Q14142 442 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 KRT31Q15323 416 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 GPC2Q8N158 579 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 DTNBP1Q96EV8 351 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 ZSCAN10Q96SZ4 725 aaPredicted RBP11.83□□□□□ -0.52
SND1-201ENST00000354725 DNAJC7Q99615 494 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms