RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 SLC12A4Q9UP95 1085 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 PMS2P54278 862 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 NPEPPSP55786 919 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 BZW1Q7L1Q6 419 aaKnown RBP13.38□□□□□ -0.27
TRERF1-202ENST00000354325 NEK8Q86SG6 692 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 SRBD1Q8N5C6 995 aaKnown RBP13.38□□□□□ -0.27
TRERF1-202ENST00000354325 ARPP21Q9UBL0 812 aaPredicted RBP13.38□□□□□ -0.27
TRERF1-202ENST00000354325 CNOT7Q9UIV1 285 aaKnown RBP13.38□□□□□ -0.27
TRERF1-202ENST00000354325 TIAM2Q8IVF5 1701 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 DDX60Q8IY21 1712 aaKnown RBP13.38□□□□□ -0.27
TRERF1-202ENST00000354325 ZSCAN5CA6NGD5 496 aaPredicted RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 PODXLO00592 558 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 DAPK3O43293 454 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 DIAPH2O60879 1101 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 LMNAP02545 664 aaKnown RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 NAPAP54920 295 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 MXRA7P84157 204 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 ENOX2Q16206 610 aaKnown RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 NAALADL2Q58DX5 795 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 OR2W6PQ8NHA6 318 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 POLD4Q9HCU8 107 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 ETAA1Q9NY74 926 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 ARL2BPQ9Y2Y0 163 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 MARF1Q9Y4F3 1742 aaKnown RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 A0A0A6YYK5 440 aaPredicted RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 WFS1O76024 890 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 KRT18P05783 430 aaKnown RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 NUDT17P0C025 328 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 QPCTQ16769 361 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 ASTE1Q2TB18 679 aaPredicted RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 LETM2Q2VYF4 491 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 CCDC77Q9BR77 488 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 DPH5Q9H2P9 285 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 PABPC3Q9H361 631 aaKnown RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 NKIRAS1Q9NYS0 192 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 ADAMTS1Q9UHI8 967 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 TMEM59LQ9UK28 342 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 MTUS1Q9ULD2 1270 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 TNS3Q68CZ2 1445 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 KLHL33A6NCF5 533 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 ZPR1O75312 459 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 PRPF4BQ13523 1007 aaKnown RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 CEP128Q6ZU80 1094 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 TLCD1Q96CP7 247 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 C8orf37Q96NL8 207 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 ROPN1BQ9BZX4 212 aaPredicted RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 ROPN1Q9HAT0 212 aaPredicted RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 SCN11AQ9UI33 1791 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 UBAP1LF5GYI3 381 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 SMIM24O75264 130 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 PPFIA2O75334 1257 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 COPS2P61201 443 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 DR1Q01658 176 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 MFN1Q8IWA4 741 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 EEF2KMTQ96G04 330 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 NAP1L4Q99733 375 aaKnown RBP13.37□□□□□ -0.27
TRERF1-202ENST00000354325 KIF9Q9HAQ2 790 aa13.37□□□□□ -0.27
TRERF1-202ENST00000354325 NLRP10Q86W26 655 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 DGKHQ86XP1 1220 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 C4orf32Q8N8J7 132 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 FBXO41Q8TF61 875 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 PLVAPQ9BX97 442 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 DDX47Q9H0S4 455 aaKnown RBP13.36□□□□□ -0.27
TRERF1-202ENST00000354325 ZFATQ9P243 1243 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 H0YGN5 161 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 EVI5O60447 810 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 CALCOCO2Q13137 446 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 IL17AQ16552 155 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 VGLL2Q8N8G2 317 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 HELBQ8NG08 1087 aaPredicted RBP13.36□□□□□ -0.27
TRERF1-202ENST00000354325 CNKSR1Q969H4 720 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 SPZ1Q9BXG8 430 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 AP1M1Q9BXS5 423 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 CCDC134Q9H6E4 229 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 PNMA2Q9UL42 364 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 NFS1Q9Y697 457 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 RASGRF2O14827 1237 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 PDE6BP35913 854 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 ALKBH5Q6P6C2 394 aaKnown RBP13.36□□□□□ -0.27
TRERF1-202ENST00000354325 PIGWQ7Z7B1 504 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 UBL4BQ8N7F7 174 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 ATXN2LQ8WWM7 1075 aaKnown RBP13.36□□□□□ -0.27
TRERF1-202ENST00000354325 CTNNBL1Q8WYA6 563 aaPredicted RBP13.36□□□□□ -0.27
TRERF1-202ENST00000354325 ATP8A2Q9NTI2 1148 aa13.36□□□□□ -0.27
TRERF1-202ENST00000354325 AFF2P51816 1311 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 FCER1AP12319 257 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 FGFR2P21802 821 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 TXNRD1Q16881 649 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 FAM26FQ5R3K3 315 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 SDR42E1Q8WUS8 393 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 DTNBP1Q96EV8 351 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 NT5C3AQ9H0P0 336 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRERF1-202ENST00000354325 RPL13P26373 211 aaKnown RBP13.35□□□□□ -0.27
TRERF1-202ENST00000354325 SKIV2L2P42285 1042 aaKnown RBP13.35□□□□□ -0.27
TRERF1-202ENST00000354325 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRERF1-202ENST00000354325 CTTNBP2NLQ9P2B4 639 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms