RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 DNAJB3Q8WWF6 145 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 FAM227BQ96M60 508 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 MAP3K20Q9NYL2 800 aaKnown RBP18.37■□□□□ 0.53
DDX55-202ENST00000354291 TELO2Q9Y4R8 837 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 PCDHA1Q9Y5I3 950 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 NRCAMQ92823 1304 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 CD52P31358 61 aa18.36■□□□□ 0.53
DDX55-202ENST00000354291 GATMP50440 423 aa18.36■□□□□ 0.53
DDX55-202ENST00000354291 MCMDC2Q4G0Z9 681 aa18.36■□□□□ 0.53
DDX55-202ENST00000354291 TAF2Q6P1X5 1199 aa18.36■□□□□ 0.53
DDX55-202ENST00000354291 TSHZ1Q6ZSZ6 1077 aa18.36■□□□□ 0.53
DDX55-202ENST00000354291 NPAS4Q8IUM7 802 aa18.36■□□□□ 0.53
DDX55-202ENST00000354291 LINC01599Q8WXQ3 324 aa18.36■□□□□ 0.53
DDX55-202ENST00000354291 RNF41Q9H4P4 317 aaPredicted RBP18.36■□□□□ 0.53
DDX55-202ENST00000354291 AGO3Q9H9G7 860 aaKnown RBP18.36■□□□□ 0.53
DDX55-202ENST00000354291 RTEL1Q9NZ71 1219 aa18.36■□□□□ 0.53
DDX55-202ENST00000354291 CDY2AQ9Y6F7 541 aa18.36■□□□□ 0.53
DDX55-202ENST00000354291 SALL3Q9BXA9 1300 aa18.35■□□□□ 0.53
DDX55-202ENST00000354291 GCOM1H8Y6P7 765 aaPredicted RBP18.35■□□□□ 0.53
DDX55-202ENST00000354291 POLR2MP0CAP2 368 aa18.35■□□□□ 0.53
DDX55-202ENST00000354291 STAG3L1P0CL83 205 aa18.35■□□□□ 0.53
DDX55-202ENST00000354291 PCP11498 1178 aaKnown RBP18.35■□□□□ 0.53
DDX55-202ENST00000354291 TECP42680 631 aa18.35■□□□□ 0.53
DDX55-202ENST00000354291 GNPTABQ3T906 1256 aa18.35■□□□□ 0.53
DDX55-202ENST00000354291 IQCA1Q86XH1 822 aa18.35■□□□□ 0.53
DDX55-202ENST00000354291 S1PR5Q9H228 398 aa18.35■□□□□ 0.53
DDX55-202ENST00000354291 LRFN2Q9ULH4 789 aa18.35■□□□□ 0.53
DDX55-202ENST00000354291 PCDHB12Q9Y5F1 795 aa18.35■□□□□ 0.53
DDX55-202ENST00000354291 EP300Q09472 2414 aaPredicted RBP18.35■□□□□ 0.53
DDX55-202ENST00000354291 NEDD4P46934 1319 aa18.34■□□□□ 0.53
DDX55-202ENST00000354291 PPP1R11O60927 126 aaPredicted RBP18.34■□□□□ 0.53
DDX55-202ENST00000354291 ERVFC1P60507 584 aa18.34■□□□□ 0.53
DDX55-202ENST00000354291 GHRHRQ02643 423 aa18.34■□□□□ 0.53
DDX55-202ENST00000354291 DUSP6Q16828 381 aa18.34■□□□□ 0.53
DDX55-202ENST00000354291 CCDC178Q5BJE1 867 aa18.34■□□□□ 0.53
DDX55-202ENST00000354291 LLGL2Q6P1M3 1020 aa18.34■□□□□ 0.53
DDX55-202ENST00000354291 UBALD2Q8IYN6 164 aa18.34■□□□□ 0.53
DDX55-202ENST00000354291 EVI5LQ96CN4 794 aa18.34■□□□□ 0.53
DDX55-202ENST00000354291 CDCA3Q99618 268 aaPredicted RBP18.34■□□□□ 0.53
DDX55-202ENST00000354291 CACNA1BQ00975 2339 aa18.34■□□□□ 0.53
DDX55-202ENST00000354291 A0A0D9SFI3 127 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 SPATA31C2B4DYI2 1134 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 BRD1O95696 1058 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 SRGAP2BP0DMP2 458 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 PDE1AP54750 535 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 PPFIA1Q13136 1202 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 MTMR3Q13615 1198 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 ASTLQ6HA08 431 aaPredicted RBP18.33■□□□□ 0.52
DDX55-202ENST00000354291 ANKRD54Q6NXT1 300 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 TICAM2Q86XR7 235 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 CRIPAKQ8N1N5 446 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 STAG2Q8N3U4 1231 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 MFSD1Q9H3U5 465 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 SORCS3Q9UPU3 1222 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 NR2E1Q9Y466 385 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 DMXL1Q9Y485 3027 aa18.33■□□□□ 0.52
DDX55-202ENST00000354291 MYO10Q9HD67 2058 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 SCG2P13521 617 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 MARK3P27448 753 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 MRPS9P82933 396 aaKnown RBP18.32■□□□□ 0.52
DDX55-202ENST00000354291 UBE3AQ05086 875 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 SEMA3FQ13275 785 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 GRIK4Q16099 956 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 MCTP2Q6DN12 878 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 SYCE2Q6PIF2 218 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 ZNF589Q86UQ0 364 aaPredicted RBP18.32■□□□□ 0.52
DDX55-202ENST00000354291 SAMD3Q8N6K7 520 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 ZSCAN10Q96SZ4 725 aaPredicted RBP18.32■□□□□ 0.52
DDX55-202ENST00000354291 FTHL17Q9BXU8 183 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 FAM49AQ9H0Q0 323 aaPredicted RBP18.32■□□□□ 0.52
DDX55-202ENST00000354291 SMOC2Q9H3U7 446 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 RWDD1Q9H446 243 aaPredicted RBP18.32■□□□□ 0.52
DDX55-202ENST00000354291 TMEM260Q9NX78 707 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 TUBE1Q9UJT0 475 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 KAT6AQ92794 2004 aa18.32■□□□□ 0.52
DDX55-202ENST00000354291 ZNF292O60281 2723 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 FSD2A1L4K1 749 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 KLRF2D3W0D1 207 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 ZNF213O14771 459 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 ZBTB5O15062 677 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 FGF18O76093 207 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 IGBP1P78318 339 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 MRPS6P82932 125 aaKnown RBP18.31■□□□□ 0.52
DDX55-202ENST00000354291 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 THNSL1Q8IYQ7 743 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 ENAHQ8N8S7 591 aaPredicted RBP18.31■□□□□ 0.52
DDX55-202ENST00000354291 ZBTB10Q96DT7 871 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 AAASQ9NRG9 546 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 CDH22Q9UJ99 828 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 PADI3Q9ULW8 664 aa18.31■□□□□ 0.52
DDX55-202ENST00000354291 MED19A0JLT2 244 aaPredicted RBP18.3■□□□□ 0.52
DDX55-202ENST00000354291 FIBPO43427 364 aa18.3■□□□□ 0.52
DDX55-202ENST00000354291 TCF7P36402 384 aaPredicted RBP18.3■□□□□ 0.52
DDX55-202ENST00000354291 TMEM62Q0P6H9 643 aa18.3■□□□□ 0.52
DDX55-202ENST00000354291 APOBRQ0VD83 1088 aa18.3■□□□□ 0.52
DDX55-202ENST00000354291 IER5Q5VY09 327 aa18.3■□□□□ 0.52
DDX55-202ENST00000354291 PLPP4Q5VZY2 271 aa18.3■□□□□ 0.52
DDX55-202ENST00000354291 TMEM184AQ6ZMB5 413 aa18.3■□□□□ 0.52
DDX55-202ENST00000354291 INPP4AQ96PE3 977 aaPredicted RBP18.3■□□□□ 0.52
DDX55-202ENST00000354291 PCDHB7Q9Y5E2 793 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms