RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 MCPH1Q8NEM0 835 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 ZNF653Q96CK0 615 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 GDAP1L1Q96MZ0 367 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 PPARDQ03181 441 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 TCP11X2Q5H9J9 407 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 PPP4R3CPQ6ZMV5 832 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 GABPB2Q8TAK5 448 aaPredicted RBP16.2■□□□□ 0.18
COL17A1-201ENST00000353479 SLIT1O75093 1534 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 ZNF233A6NK53 670 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 GRIN3BO60391 1043 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 MYO1EQ12965 1108 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 SLFN12LQ6IEE8 588 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 FAM149B1Q96BN6 582 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 POLLQ9UGP5 575 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 DDX41Q9UJV9 622 aaKnown RBP16.2■□□□□ 0.18
COL17A1-201ENST00000353479 COL5A2P05997 1499 aaPredicted RBP16.2■□□□□ 0.18
COL17A1-201ENST00000353479 ATP1A3P13637 1013 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 COG2Q14746 738 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 CCDC94Q9BW85 323 aaPredicted RBP16.2■□□□□ 0.18
COL17A1-201ENST00000353479 VPS37BQ9H9H4 285 aa16.2■□□□□ 0.18
COL17A1-201ENST00000353479 IGSF3O75054 1194 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 P4HBP07237 508 aaKnown RBP16.19■□□□□ 0.18
COL17A1-201ENST00000353479 QARSP47897 775 aaKnown RBP16.19■□□□□ 0.18
COL17A1-201ENST00000353479 ETF1P62495 437 aaKnown RBP16.19■□□□□ 0.18
COL17A1-201ENST00000353479 SEPT10Q9P0V9 454 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 GOLGA8SH3BPF8 625 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 ALDH3A1P30838 453 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 SFNP31947 248 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 ARPP19P56211 112 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 ZNF280CQ8ND82 737 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 KAZALD1Q96I82 304 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 PYCARDQ9ULZ3 195 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 NAA35Q5VZE5 725 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 NME8Q8N427 588 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 RPGRIP1Q96KN7 1286 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 NYAP2Q9P242 653 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 NEURL4Q96JN8 1562 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 GPR75-ASB3A0A0A6YYF3 556 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 SLC16A4O15374 487 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 TCP1P17987 556 aaKnown RBP16.19■□□□□ 0.18
COL17A1-201ENST00000353479 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
COL17A1-201ENST00000353479 ADCY8P40145 1251 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 ORC2Q13416 577 aaPredicted RBP16.19■□□□□ 0.18
COL17A1-201ENST00000353479 KRT31Q15323 416 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 GEN1Q17RS7 908 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 SAMD15Q9P1V8 674 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 ODF2LQ9ULJ1 636 aa16.19■□□□□ 0.18
COL17A1-201ENST00000353479 TRIM49BA6NDI0 452 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 WDR46O15213 610 aaKnown RBP16.18■□□□□ 0.18
COL17A1-201ENST00000353479 USP11P51784 963 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 SPATA33Q96N06 139 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 TAB3Q8N5C8 712 aaPredicted RBP16.18■□□□□ 0.18
COL17A1-201ENST00000353479 FAM81BQ96LP2 452 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 LXNQ9BS40 222 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 VIMP08670 466 aaKnown RBP16.18■□□□□ 0.18
COL17A1-201ENST00000353479 RSRC2Q7L4I2 434 aaKnown RBP16.18■□□□□ 0.18
COL17A1-201ENST00000353479 GOLGA6BA6NDN3 693 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 RFX1P22670 979 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 GUCY2FP51841 1108 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 COASYQ13057 564 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 SURF1Q15526 300 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 SLC10A5Q5PT55 438 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 KIAA1841Q6NSI8 718 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 MYRIPQ8NFW9 859 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 RAB3IL1Q8TBN0 382 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 A6NJR5 290 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 MTRQ99707 1265 aa16.18■□□□□ 0.18
COL17A1-201ENST00000353479 NEK9Q8TD19 979 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 GRK7Q8WTQ7 553 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 LPAR1Q92633 364 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 ENC1O14682 589 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 GNAT1P11488 350 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 MAPK4P31152 587 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 ANTXR2P58335 489 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 ITKQ08881 620 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 MAPK6Q16659 721 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 PHLDB2Q86SQ0 1253 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 VSTM4Q8IW00 320 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 ZNF668Q96K58 619 aaPredicted RBP16.17■□□□□ 0.18
COL17A1-201ENST00000353479 SMC6Q96SB8 1091 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 DEFB129Q9H1M3 183 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 CLDN3O15551 220 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 PDZD4Q76G19 769 aaPredicted RBP16.17■□□□□ 0.18
COL17A1-201ENST00000353479 FMR1NBQ8N0W7 255 aaPredicted RBP16.17■□□□□ 0.18
COL17A1-201ENST00000353479 PPP1R13BQ96KQ4 1090 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 DPH5Q9H2P9 285 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 ZBED6P86452 979 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 RBM46Q8TBY0 533 aaKnown RBP16.17■□□□□ 0.18
COL17A1-201ENST00000353479 TRIM11Q96F44 468 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 EIF2AK1Q9BQI3 630 aaKnown RBP16.17■□□□□ 0.18
COL17A1-201ENST00000353479 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
COL17A1-201ENST00000353479 OATP04181 439 aa16.16■□□□□ 0.18
COL17A1-201ENST00000353479 PSMC5P62195 406 aa16.16■□□□□ 0.18
COL17A1-201ENST00000353479 BFSP1Q12934 665 aa16.16■□□□□ 0.18
COL17A1-201ENST00000353479 TBC1D31Q96DN5 1066 aa16.16■□□□□ 0.18
COL17A1-201ENST00000353479 KIF2CQ99661 725 aa16.16■□□□□ 0.18
COL17A1-201ENST00000353479 IL25Q9H293 177 aa16.16■□□□□ 0.18
COL17A1-201ENST00000353479 KRT15P19012 456 aa16.16■□□□□ 0.18
COL17A1-201ENST00000353479 RPS12P25398 132 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms