RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PLAGL2Q9UPG8 496 aa18.44■□□□□ 0.54
SAMM50-201ENST00000350028 CTAGE9A4FU28 777 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 PDXKO00764 312 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 TADA3O75528 432 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 IPO7O95373 1038 aaKnown RBP18.43■□□□□ 0.54
SAMM50-201ENST00000350028 ERCC6LQ2NKX8 1250 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 SLC35F6Q8N357 371 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 LRRN4CLQ8ND94 238 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 UNC45AQ9H3U1 944 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 OLFML3Q9NRN5 406 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 PPP1R9AQ9ULJ8 1098 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 CTDP1Q9Y5B0 961 aaPredicted RBP18.43■□□□□ 0.54
SAMM50-201ENST00000350028 IPO5O00410 1097 aaKnown RBP18.43■□□□□ 0.54
SAMM50-201ENST00000350028 CHMP2AO43633 222 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 ZBED4O75132 1171 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 ALAS1P13196 640 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 PPP2R3AQ06190 1150 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 NBPF12Q5TAG4 269 aaPredicted RBP18.43■□□□□ 0.54
SAMM50-201ENST00000350028 C1orf186Q6ZWK4 172 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 CCDC94Q9BW85 323 aaPredicted RBP18.43■□□□□ 0.54
SAMM50-201ENST00000350028 AS3MTQ9HBK9 375 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 FAM207AQ9NSI2 230 aaPredicted RBP18.43■□□□□ 0.54
SAMM50-201ENST00000350028 KCND2Q9NZV8 630 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 ZNF112Q9UJU3 913 aa18.43■□□□□ 0.54
SAMM50-201ENST00000350028 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.43■□□□□ 0.54
SAMM50-201ENST00000350028 RBBP6Q7Z6E9 1792 aaKnown RBP18.42■□□□□ 0.54
SAMM50-201ENST00000350028 ASTN2O75129 1339 aaPredicted RBP18.42■□□□□ 0.54
SAMM50-201ENST00000350028 DOCK1Q14185 1865 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 NFIBO00712 420 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 FLOT1O75955 427 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 FAM13AO94988 1023 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 CASP5P51878 434 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 HERVK_113P62684 666 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 KCNMA1Q12791 1236 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 FRMD5Q7Z6J6 570 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 CPXCR1Q8N123 301 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 PIGOQ8TEQ8 1089 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 NAPGQ99747 312 aaPredicted RBP18.42■□□□□ 0.54
SAMM50-201ENST00000350028 NUCKS1Q9H1E3 243 aaKnown RBP18.42■□□□□ 0.54
SAMM50-201ENST00000350028 RAVER2Q9HCJ3 691 aaKnown RBP18.42■□□□□ 0.54
SAMM50-201ENST00000350028 TYW1Q9NV66 732 aaKnown RBP18.42■□□□□ 0.54
SAMM50-201ENST00000350028 COL20A1Q9P218 1284 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 SEL1LQ9UBV2 794 aa18.42■□□□□ 0.54
SAMM50-201ENST00000350028 LOXHD1Q8IVV2 1947 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 RSPH10B2B2RC85 870 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 EIF3DO15371 548 aaKnown RBP eCLIP18.41■□□□□ 0.54
SAMM50-201ENST00000350028 RSPH10BP0C881 870 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 MYBP10242 640 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 VCAM1P19320 739 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 NR2F2P24468 414 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 RPL13P26373 211 aaKnown RBP18.41■□□□□ 0.54
SAMM50-201ENST00000350028 PCNX4Q63HM2 1172 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 KIAA1328Q86T90 577 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 APOBEC3FQ8IUX4 373 aaKnown RBP18.41■□□□□ 0.54
SAMM50-201ENST00000350028 SCYL3Q8IZE3 742 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 CCDC42Q96M95 316 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 CDC23Q9UJX2 597 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 UBIAD1Q9Y5Z9 338 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 FRMPD4Q14CM0 1322 aa18.41■□□□□ 0.54
SAMM50-201ENST00000350028 EPHB6O15197 1021 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 KRT86O43790 486 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 PRPF6O94906 941 aaKnown RBP18.4■□□□□ 0.54
SAMM50-201ENST00000350028 ITGB5P18084 799 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 HOXD13P35453 343 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 MTMR2Q13614 643 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 PDXDC1Q6P996 788 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 SLC30A10Q6XR72 485 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 CACNA2D4Q7Z3S7 1137 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 EHBP1Q8NDI1 1231 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 SYTL5Q8TDW5 730 aaPredicted RBP18.4■□□□□ 0.54
SAMM50-201ENST00000350028 BAP1Q92560 729 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 RPAP3Q9H6T3 665 aaPredicted RBP18.4■□□□□ 0.54
SAMM50-201ENST00000350028 CEP72Q9P209 647 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 ODF2LQ9ULJ1 636 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 GCNT3O95395 438 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 ABL1P00519 1130 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 SPA17Q15506 151 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 CCDC122Q5T0U0 273 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 RRAGAQ7L523 313 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 SMCR8Q8TEV9 937 aaPredicted RBP18.4■□□□□ 0.54
SAMM50-201ENST00000350028 JAKMIP2Q96AA8 810 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 ZFP91Q96JP5 570 aaPredicted RBP18.4■□□□□ 0.54
SAMM50-201ENST00000350028 METTL14Q9HCE5 456 aaKnown RBP18.4■□□□□ 0.54
SAMM50-201ENST00000350028 JADE2Q9NQC1 790 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 GUCA1BQ9UMX6 200 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 SBF1O95248 1867 aa18.4■□□□□ 0.54
SAMM50-201ENST00000350028 UBE4BO95155 1302 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 BACE1P56817 501 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 SPP2Q13103 211 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 TKFCQ3LXA3 575 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 MUM1L1Q5H9M0 696 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 STXBP4Q6ZWJ1 553 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 MIER3Q7Z3K6 550 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 MYCT1Q8N699 235 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 CEP112Q8N8E3 955 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 SYN2Q92777 582 aaPredicted RBP18.39■□□□□ 0.53
SAMM50-201ENST00000350028 PARVGQ9HBI0 331 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 PICK1Q9NRD5 415 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 KCNH7Q9NS40 1196 aa18.39■□□□□ 0.53
SAMM50-201ENST00000350028 LRRC53A6NM62 1247 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms