RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 ATG16L1Q676U5 607 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TRAPPC9Q96Q05 1148 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 FAM192AQ9GZU8 254 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 RBM12Q9NTZ6 932 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 YY1P25490 414 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 MRPL12P52815 198 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 PDXDC1Q6P996 788 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 MIGA1Q8NAN2 632 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 EHMT1Q9H9B1 1298 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 MBD4O95243 580 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 ATP6V1B1P15313 513 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TARSP26639 723 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 AARSP49588 968 aaKnown RBP eCLIP12.68□□□□□ -0.385e-7■■■■■ 27.5
CDK5RAP2-201ENST00000349780 KRT81Q14533 505 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 RASA3Q14644 834 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TRMT10CQ7L0Y3 403 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 SMARCAL1Q9NZC9 954 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TOM1L1O75674 476 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 HSPD1P10809 573 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 MAGEB6P1A0A0J9YX57 407 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 CAPN9O14815 690 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 CDC25AP30304 524 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 KAZNQ674X7 775 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TAB3Q8N5C8 712 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 SLC17A8Q8NDX2 589 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 A1CFQ9NQ94 594 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 RAB20Q9NX57 234 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TMOD3Q9NYL9 352 aa12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 ARPP21Q9UBL0 812 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 R3HDM2Q9Y2K5 976 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP2-201ENST00000349780 NOP56O00567 594 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 DEAF1O75398 565 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 MAP4P27816 1152 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 SERPINB8P50452 374 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 YWHAGP61981 247 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 RABGAP1LQ5R372 815 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 CATSPER1Q8NEC5 780 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 ZCRB1Q8TBF4 217 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TTC17Q96AE7 1141 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TRIM11Q96F44 468 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 ATXN10Q9UBB4 475 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 ZNF652Q9Y2D9 606 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 STRNO43815 780 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 NR1H3Q13133 447 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 CRLF3Q8IUI8 442 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 FAM186BQ8IYM0 893 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 CHP1Q99653 195 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 SH3GL1Q99961 368 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TMBIM4Q9HC24 238 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 A0A1B0GTH6 734 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 HIC1Q14526 733 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 RBBP8NLQ8NC74 664 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 RPS6KC1Q96S38 1066 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 SRPRBQ9Y5M8 271 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 RSPH10B2B2RC85 870 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 RSPH10BP0C881 870 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 HDAC4P56524 1084 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 USP44Q9H0E7 712 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 DIS3Q9Y2L1 958 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 MAP3K5Q99683 1374 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 PITPNM2Q9BZ72 1349 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 UBOX5O94941 541 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 KRT3P12035 628 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 THOC5Q13769 683 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TRIM65Q6PJ69 517 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 SLITRK6Q9H5Y7 841 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TUBA8Q9NY65 449 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 NOC2LQ9Y3T9 749 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 A0A1W2PP64 1363 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 ABCA5Q8WWZ7 1642 aa12.67□□□□□ -0.38
CDK5RAP2-201ENST00000349780 GCLCP48506 637 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 KCTD21Q4G0X4 260 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 IRGCQ6NXR0 463 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 KRT28Q7Z3Y7 464 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 CCT7Q99832 543 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 IMPG2Q9BZV3 1241 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 SCHIP1Q9P0W5 487 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 OPLAHO14841 1288 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 LIN7AO14910 233 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 CHMP2AO43633 222 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 SYF2O95926 243 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 ATF7P17544 494 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 FGFR4P22455 802 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 PPP2R5BQ15173 497 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 AGAP11Q8TF27 550 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 SUCLG2Q96I99 432 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 DCLRE1BQ9H816 532 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 PRDM1O75626 825 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 EXOC3L4Q17RC7 722 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TRAPPC11Q7Z392 1133 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 TRMT112Q9UI30 125 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 DBR1Q9UK59 544 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 NLRP1Q9C000 1473 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 KITP10721 976 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 NR1I3Q14994 352 aa12.66□□□□□ -0.38
CDK5RAP2-201ENST00000349780 PCDHB13Q9Y5F0 798 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms