RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 NDUFA8P51970 172 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 SGSM1Q2NKQ1 1148 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 LACTB2Q53H82 288 aaPredicted RBP13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 MIER3Q7Z3K6 550 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 ST13P4Q8IZP2 240 aaPredicted RBP13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 RAPGEF5Q92565 580 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 MAP4K1Q92918 833 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 NACC2Q96BF6 587 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 DMGDHQ9UI17 866 aaKnown RBP13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 ZNF185O15231 689 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 TEX28O15482 410 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 VDRP11473 427 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 PHBP35232 272 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 EXOC3L1Q86VI1 746 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 NKX2-3Q8TAU0 364 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 NELFBQ8WX92 580 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 SNX27Q96L92 541 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 PAGR1Q9BTK6 254 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 COMMD3-BMI1R4GMX3 469 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 FAM208AQ9UK61 1670 aaKnown RBP13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 LTN1O94822 1766 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 ANKARQ7Z5J8 1434 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 A6NJR5 290 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 PPIP5K2O43314 1243 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 KRT86O43790 486 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 ATP1A1P05023 1023 aaKnown RBP13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 POLR3DP05423 398 aaPredicted RBP13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 EIF2B2P49770 351 aaKnown RBP13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 USP11P51784 963 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 PDE4BQ07343 736 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 ZNF268Q14587 947 aaPredicted RBP13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 KIF22Q14807 665 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 STMN2Q93045 179 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 OLFM3Q96PB7 478 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 TRPV5Q9NQA5 729 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 PPP1R9AQ9ULJ8 1098 aa13.24□□□□□ -0.29
CTNNB1-201ENST00000349496 GSTA1P08263 222 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 PLOD1Q02809 727 aaPredicted RBP13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 SCARF1Q14162 830 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 EZH2Q15910 746 aaKnown RBP13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 MLKLQ8NB16 471 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.23□□□□□ -0.291e-10■■■■■ 35.8
CTNNB1-201ENST00000349496 STOML1Q9UBI4 398 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 NFAT5O94916 1531 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 ADAMTS2O95450 1211 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 YEATS4O95619 227 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 KRT16P08779 473 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 PLCG2P16885 1265 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 PPP2R3CQ969Q6 453 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 EPB41L5Q9HCM4 733 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 A0A0J9YVX5 310 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 IKBKBO14920 756 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 TSPAN9O75954 239 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 RFC1P35251 1148 aaPredicted RBP13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 RBL2Q08999 1139 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 USH1GQ495M9 461 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 INTS8Q75QN2 995 aaKnown RBP13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 CNGA4Q8IV77 575 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 RETREG2Q8NC44 543 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 GABPB2Q8TAK5 448 aaPredicted RBP13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 VMP1Q96GC9 406 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 MAELQ96JY0 434 aaKnown RBP13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 CCDC42Q96M95 316 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 ASAP1Q9ULH1 1129 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 TRIM17Q9Y577 477 aa13.23□□□□□ -0.29
CTNNB1-201ENST00000349496 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 PPP1R2P41236 205 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 SYKP43405 635 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 PPP2R2AP63151 447 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 WASHC4Q2M389 1173 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 EMC10Q5UCC4 262 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 PPP1R2P3Q6NXS1 205 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 RIBC1Q8N443 379 aaPredicted RBP13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 ADAM22Q9P0K1 906 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 LRCH1Q9Y2L9 728 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 FER1L4A9Z1Z3 1794 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 SART1O43290 800 aaKnown RBP13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 KRT75O95678 551 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 RFX5P48382 616 aaPredicted RBP13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 R3HDM1Q15032 1099 aaKnown RBP13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 KSR1Q8IVT5 923 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 KCNN1Q92952 543 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 NEK1Q96PY6 1258 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 CLIC5Q9NZA1 410 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 TRAPPC3O43617 180 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 EPB41P11171 864 aaKnown RBP13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 CASP14P31944 242 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 RNASE9P60153 205 aaKnown RBP13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 MAGOHP61326 146 aaKnown RBP13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 PPARAQ07869 468 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 NOP9Q86U38 636 aaKnown RBP13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 TMTC1Q8IUR5 882 aa13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 MAGOHBQ96A72 148 aaKnown RBP13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 ZMYND8Q9ULU4 1186 aaPredicted RBP13.22□□□□□ -0.29
CTNNB1-201ENST00000349496 PCP4L1A6NKN8 68 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 STAMBPO95630 424 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 ERCC5P28715 1186 aaPredicted RBP13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 KCNQ4P56696 695 aa13.21□□□□□ -0.29
CTNNB1-201ENST00000349496 WASHC5Q12768 1159 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms