RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 HSF2BPO75031 334 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 PPFIA1Q13136 1202 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 PDCLQ13371 301 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 GDF3Q9NR23 364 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 AIPL1Q9NZN9 384 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 HDAC9Q9UKV0 1011 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 MEIS2O14770 477 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 CETN3O15182 167 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 CASP4P49662 377 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 CORO7P57737 925 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 GIT2Q14161 759 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 SEPT2Q15019 361 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 SFR1Q86XK3 245 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 RBM46Q8TBY0 533 aaKnown RBP19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 PIK3R5Q8WYR1 880 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 CAVIN3Q969G5 261 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 PCDHGC5Q9Y5F6 944 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 KCNK3O14649 394 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 RAD51CO43502 376 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 EEF2P13639 858 aaKnown RBP19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 SLC20A2Q08357 652 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 USH1GQ495M9 461 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 DCAF17Q5H9S7 520 aaPredicted RBP19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 GPATCH4Q5T3I0 446 aaKnown RBP19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 IFT20Q8IY31 132 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 IQCKQ8N0W5 287 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 CLIC2O15247 247 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 SPATA31C1P0DKV0 1188 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 GCFC2P16383 781 aaKnown RBP19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 NOP2P46087 812 aaKnown RBP19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 APOBEC3HQ6NTF7 200 aaKnown RBP19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 PPP1R18Q6NYC8 613 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 PACS2Q86VP3 889 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 DDX42Q86XP3 938 aaKnown RBP eCLIP19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 RUFY1Q96T51 708 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 REEP2Q9BRK0 252 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 SRCAPQ6ZRS2 3230 aa19.86■□□□□ 0.77
PTP4A3-202ENST00000349124 GOLGA8KD6RF30 607 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 AKAP3O75969 853 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 UCHL3P15374 230 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 MARSP56192 900 aaKnown RBP19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 SPIRE1Q08AE8 756 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 NNTQ13423 1086 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 CDC37Q16543 378 aaPredicted RBP19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 AP1M1Q9BXS5 423 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 NUCKS1Q9H1E3 243 aaKnown RBP19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 KDM3AQ9Y4C1 1321 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 FAM86B1E9PN63 330 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 OPA1O60313 960 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 FAM86B2P0C5J1 330 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 TCERG1LQ5VWI1 586 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 SPAG5Q96R06 1193 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 MYH7BA7E2Y1 1941 aa19.85■□□□□ 0.77
PTP4A3-202ENST00000349124 GNA14O95837 355 aa19.84■□□□□ 0.77
PTP4A3-202ENST00000349124 PON1P27169 355 aa19.84■□□□□ 0.77
PTP4A3-202ENST00000349124 ARHGAP4P98171 946 aa19.84■□□□□ 0.77
PTP4A3-202ENST00000349124 ALS2CLQ60I27 953 aa19.84■□□□□ 0.77
PTP4A3-202ENST00000349124 SIAH1Q8IUQ4 282 aa19.84■□□□□ 0.77
PTP4A3-202ENST00000349124 HOXA13P31271 388 aaPredicted RBP19.84■□□□□ 0.77
PTP4A3-202ENST00000349124 MAGEA9P43362 315 aa19.84■□□□□ 0.77
PTP4A3-202ENST00000349124 FOXR2Q6PJQ5 311 aa19.84■□□□□ 0.77
PTP4A3-202ENST00000349124 RGL1Q9NZL6 768 aa19.84■□□□□ 0.77
PTP4A3-202ENST00000349124 ARMCX3Q9UH62 379 aaPredicted RBP19.84■□□□□ 0.77
PTP4A3-202ENST00000349124 BTAF1O14981 1849 aa19.84■□□□□ 0.77
PTP4A3-202ENST00000349124 DDTLA6NHG4 134 aaPredicted RBP19.83■□□□□ 0.77
PTP4A3-202ENST00000349124 EIF3HO15372 352 aaKnown RBP eCLIP19.83■□□□□ 0.77
PTP4A3-202ENST00000349124 ZEB2O60315 1214 aa19.83■□□□□ 0.77
PTP4A3-202ENST00000349124 GLE1Q53GS7 698 aaKnown RBP19.83■□□□□ 0.77
PTP4A3-202ENST00000349124 CFAP58Q5T655 872 aa19.83■□□□□ 0.77
PTP4A3-202ENST00000349124 USP38Q8NB14 1042 aa19.83■□□□□ 0.77
PTP4A3-202ENST00000349124 ETNPPLQ8TBG4 499 aa19.83■□□□□ 0.77
PTP4A3-202ENST00000349124 ZC3H12CQ9C0D7 883 aaKnown RBP19.83■□□□□ 0.77
PTP4A3-202ENST00000349124 TSKSQ9UJT2 592 aa19.83■□□□□ 0.77
PTP4A3-202ENST00000349124 USP21Q9UK80 565 aa19.83■□□□□ 0.77
PTP4A3-202ENST00000349124 FRMD3A2A2Y4 597 aa19.83■□□□□ 0.76
PTP4A3-202ENST00000349124 ZBTB39O15060 712 aa19.83■□□□□ 0.76
PTP4A3-202ENST00000349124 KNOP1Q1ED39 458 aaKnown RBP19.83■□□□□ 0.76
PTP4A3-202ENST00000349124 SLFN13Q68D06 897 aa19.83■□□□□ 0.76
PTP4A3-202ENST00000349124 KSR1Q8IVT5 923 aa19.83■□□□□ 0.76
PTP4A3-202ENST00000349124 SWAP70Q9UH65 585 aa19.83■□□□□ 0.76
PTP4A3-202ENST00000349124 ZNF831Q5JPB2 1677 aa19.83■□□□□ 0.76
PTP4A3-202ENST00000349124 CEP104O60308 925 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 RPS6KA1Q15418 735 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 RNPC3Q96LT9 517 aaKnown RBP19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 BHMT2Q9H2M3 363 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 NAGPAQ9UK23 515 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 PCDHB13Q9Y5F0 798 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 PPEF1O14829 653 aaPredicted RBP19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 EPB41P11171 864 aaKnown RBP19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 TNFRSF8P28908 595 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 HOXA10P31260 410 aaPredicted RBP19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 USP11P51784 963 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 GUCY1A3Q02108 690 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 EXOC3L4Q17RC7 722 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 ALKBH5Q6P6C2 394 aaKnown RBP19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 ZC3H3Q8IXZ2 948 aaKnown RBP19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 OR2W6PQ8NHA6 318 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 LENG9Q96B70 501 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 RUSC1Q9BVN2 902 aa19.82■□□□□ 0.76
PTP4A3-202ENST00000349124 DNM3Q9UQ16 869 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms