RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 BLOC1S4Q9NUP1 217 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 STK17AQ9UEE5 414 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 TRIM17Q9Y577 477 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 IGKV6D-21A0A0A0MT36 114 aa30.32■■■□□ 2.44
SSBP4-202ENST00000348495 HMGCRP04035 888 aa30.32■■■□□ 2.44
SSBP4-202ENST00000348495 PSAPP07602 524 aa30.32■■■□□ 2.44
SSBP4-202ENST00000348495 SUPT20HL2P0C7V6 817 aa30.32■■■□□ 2.44
SSBP4-202ENST00000348495 CACNB2Q08289 660 aaPredicted RBP30.32■■■□□ 2.44
SSBP4-202ENST00000348495 MIS18BP1Q6P0N0 1132 aa30.32■■■□□ 2.44
SSBP4-202ENST00000348495 ELOA2Q8IYF1 753 aaPredicted RBP30.32■■■□□ 2.44
SSBP4-202ENST00000348495 BANK1Q8NDB2 785 aa30.32■■■□□ 2.44
SSBP4-202ENST00000348495 SPATA33Q96N06 139 aa30.32■■■□□ 2.44
SSBP4-202ENST00000348495 LXNQ9BS40 222 aa30.32■■■□□ 2.44
SSBP4-202ENST00000348495 CUEDC2Q9H467 287 aa30.32■■■□□ 2.44
SSBP4-202ENST00000348495 FAM184BQ9ULE4 1060 aa30.32■■■□□ 2.44
SSBP4-202ENST00000348495 MAP3K21Q5TCX8 1036 aa30.31■■■□□ 2.44
SSBP4-202ENST00000348495 TPH2Q8IWU9 490 aa30.31■■■□□ 2.44
SSBP4-202ENST00000348495 CNNM3Q8NE01 707 aa30.31■■■□□ 2.44
SSBP4-202ENST00000348495 SEPT1Q8WYJ6 367 aa30.31■■■□□ 2.44
SSBP4-202ENST00000348495 NUP62CLQ9H1M0 184 aa30.31■■■□□ 2.44
SSBP4-202ENST00000348495 WDR81Q562E7 1941 aa30.31■■■□□ 2.44
SSBP4-202ENST00000348495 QARSP47897 775 aaKnown RBP30.3■■■□□ 2.44
SSBP4-202ENST00000348495 CCDC183Q5T5S1 534 aa30.3■■■□□ 2.44
SSBP4-202ENST00000348495 SH3RF1Q7Z6J0 888 aa30.3■■■□□ 2.44
SSBP4-202ENST00000348495 SYAP1Q96A49 352 aaPredicted RBP30.3■■■□□ 2.44
SSBP4-202ENST00000348495 LYPLA2O95372 231 aa30.3■■■□□ 2.44
SSBP4-202ENST00000348495 UGCGQ16739 394 aa30.3■■■□□ 2.44
SSBP4-202ENST00000348495 CCDC60Q8IWA6 550 aaPredicted RBP30.3■■■□□ 2.44
SSBP4-202ENST00000348495 SLAIN1Q8ND83 568 aa30.3■■■□□ 2.44
SSBP4-202ENST00000348495 ZSWIM4Q9H7M6 989 aa30.3■■■□□ 2.44
SSBP4-202ENST00000348495 HSPA8P11142 646 aaKnown RBP30.29■■■□□ 2.44
SSBP4-202ENST00000348495 AKR1A1P14550 325 aa30.29■■■□□ 2.44
SSBP4-202ENST00000348495 PSMC5P62195 406 aa30.29■■■□□ 2.44
SSBP4-202ENST00000348495 CEP57L1Q8IYX8 460 aa30.29■■■□□ 2.44
SSBP4-202ENST00000348495 PPTC7Q8NI37 304 aa30.29■■■□□ 2.44
SSBP4-202ENST00000348495 MTRQ99707 1265 aa30.29■■■□□ 2.44
SSBP4-202ENST00000348495 MAGEF1Q9HAY2 307 aa30.29■■■□□ 2.44
SSBP4-202ENST00000348495 PTCH2Q9Y6C5 1203 aa30.29■■■□□ 2.44
SSBP4-202ENST00000348495 IGSF9BQ9UPX0 1349 aa30.28■■■□□ 2.44
SSBP4-202ENST00000348495 PRKAR2AP13861 404 aaKnown RBP30.28■■■□□ 2.44
SSBP4-202ENST00000348495 PSMC6P62333 389 aa30.28■■■□□ 2.44
SSBP4-202ENST00000348495 MDM2Q00987 491 aaPredicted RBP30.28■■■□□ 2.44
SSBP4-202ENST00000348495 CAMK4Q16566 473 aa30.28■■■□□ 2.44
SSBP4-202ENST00000348495 SWSAP1Q6NVH7 229 aa30.28■■■□□ 2.44
SSBP4-202ENST00000348495 RAD54LQ92698 747 aa30.28■■■□□ 2.44
SSBP4-202ENST00000348495 PAGE5Q96GU1 130 aa30.28■■■□□ 2.44
SSBP4-202ENST00000348495 PCYT2Q99447 389 aa30.28■■■□□ 2.44
SSBP4-202ENST00000348495 KBTBD4Q9NVX7 518 aa30.28■■■□□ 2.44
SSBP4-202ENST00000348495 GABBR1Q9UBS5 961 aa30.28■■■□□ 2.44
SSBP4-202ENST00000348495 Q9Y3F1 56 aa30.28■■■□□ 2.44
SSBP4-202ENST00000348495 E9PMD0 336 aa30.27■■■□□ 2.44
SSBP4-202ENST00000348495 NOP56O00567 594 aaKnown RBP30.27■■■□□ 2.44
SSBP4-202ENST00000348495 FOXN1O15353 648 aa30.27■■■□□ 2.44
SSBP4-202ENST00000348495 TCF7P36402 384 aaPredicted RBP30.27■■■□□ 2.44
SSBP4-202ENST00000348495 KANK3Q6NY19 840 aa30.27■■■□□ 2.44
SSBP4-202ENST00000348495 C4orf19Q8IY42 314 aa30.27■■■□□ 2.44
SSBP4-202ENST00000348495 MAFBQ9Y5Q3 323 aaPredicted RBP30.27■■■□□ 2.44
SSBP4-202ENST00000348495 LGR5O75473 907 aa30.27■■■□□ 2.44
SSBP4-202ENST00000348495 HOXD8P13378 290 aaPredicted RBP30.27■■■□□ 2.44
SSBP4-202ENST00000348495 AFG1LQ8WV93 481 aa30.27■■■□□ 2.44
SSBP4-202ENST00000348495 LARP4BQ92615 738 aaKnown RBP30.27■■■□□ 2.44
SSBP4-202ENST00000348495 LENG1Q96BZ8 264 aaPredicted RBP30.27■■■□□ 2.44
SSBP4-202ENST00000348495 TNMDQ9H2S6 317 aa30.27■■■□□ 2.44
SSBP4-202ENST00000348495 SEPT4O43236 478 aa30.26■■■□□ 2.43
SSBP4-202ENST00000348495 OR6J1Q8NGC5 347 aa30.26■■■□□ 2.43
SSBP4-202ENST00000348495 AFAP1L1Q8TED9 768 aa30.26■■■□□ 2.43
SSBP4-202ENST00000348495 ATP6V0A1Q93050 837 aa30.26■■■□□ 2.43
SSBP4-202ENST00000348495 NACC1Q96RE7 527 aa30.26■■■□□ 2.43
SSBP4-202ENST00000348495 DNM3Q9UQ16 869 aa30.26■■■□□ 2.43
SSBP4-202ENST00000348495 PTPN22Q9Y2R2 807 aa30.26■■■□□ 2.43
SSBP4-202ENST00000348495 HTTP42858 3142 aa30.25■■■□□ 2.43
SSBP4-202ENST00000348495 A0A087WWV3 80 aa30.25■■■□□ 2.43
SSBP4-202ENST00000348495 CTAGE5O15320 804 aa30.25■■■□□ 2.43
SSBP4-202ENST00000348495 ZNF862O60290 1169 aa30.25■■■□□ 2.43
SSBP4-202ENST00000348495 RBM43Q6ZSC3 357 aaKnown RBP30.25■■■□□ 2.43
SSBP4-202ENST00000348495 TLK2Q86UE8 772 aa30.25■■■□□ 2.43
SSBP4-202ENST00000348495 ZNF302Q9NR11 478 aa30.25■■■□□ 2.43
SSBP4-202ENST00000348495 EMSYQ7Z589 1322 aa30.25■■■□□ 2.43
SSBP4-202ENST00000348495 BACH1O14867 736 aa30.25■■■□□ 2.43
SSBP4-202ENST00000348495 STBD1O95210 358 aa30.25■■■□□ 2.43
SSBP4-202ENST00000348495 GRK4P32298 578 aa30.25■■■□□ 2.43
SSBP4-202ENST00000348495 GRAMD1CQ8IYS0 662 aa30.25■■■□□ 2.43
SSBP4-202ENST00000348495 ZBTB39O15060 712 aa30.24■■■□□ 2.43
SSBP4-202ENST00000348495 DYNC1LI2O43237 492 aaPredicted RBP30.24■■■□□ 2.43
SSBP4-202ENST00000348495 DUSP11O75319 330 aaKnown RBP30.24■■■□□ 2.43
SSBP4-202ENST00000348495 EYA4O95677 639 aa30.24■■■□□ 2.43
SSBP4-202ENST00000348495 CCND3P30281 292 aaPredicted RBP30.24■■■□□ 2.43
SSBP4-202ENST00000348495 MCM6Q14566 821 aa30.24■■■□□ 2.43
SSBP4-202ENST00000348495 PIGOQ8TEQ8 1089 aa30.24■■■□□ 2.43
SSBP4-202ENST00000348495 CCDC34Q96HJ3 373 aa30.24■■■□□ 2.43
SSBP4-202ENST00000348495 A6NJR5 290 aa30.23■■■□□ 2.43
SSBP4-202ENST00000348495 DKC1O60832 514 aaKnown RBP eCLIP30.23■■■□□ 2.43
SSBP4-202ENST00000348495 INHAP05111 366 aa30.23■■■□□ 2.43
SSBP4-202ENST00000348495 PLA2G4BP0C869 781 aa30.23■■■□□ 2.43
SSBP4-202ENST00000348495 XRCC6P12956 609 aaKnown RBP eCLIP30.23■■■□□ 2.43
SSBP4-202ENST00000348495 AFMP43652 599 aa30.23■■■□□ 2.43
SSBP4-202ENST00000348495 PPFIA4O75335 1185 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 MMP3P08254 477 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 ATP4AP20648 1035 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 STAT5BP51692 787 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms