RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 PROCA1Q8NCQ7 364 aaPredicted RBP14.29□□□□□ -0.12
DNMT3B-203ENST00000348286 EHD2Q9NZN4 543 aa14.29□□□□□ -0.12
DNMT3B-203ENST00000348286 ATP8A1Q9Y2Q0 1164 aa14.29□□□□□ -0.12
DNMT3B-203ENST00000348286 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.29□□□□□ -0.12
DNMT3B-203ENST00000348286 CNTNAP4Q9C0A0 1308 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 ECE2O60344 883 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 N4BP1O75113 896 aaKnown RBP14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 TRIM49P0CI25 452 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 TRIM49CP0CI26 452 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 PLTPP55058 493 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 VPS72Q15906 364 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 KNOP1Q1ED39 458 aaKnown RBP14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 TTI2Q6NXR4 508 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 BANK1Q8NDB2 785 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 FLAD1Q8NFF5 587 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 RAB17Q9H0T7 212 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 KBTBD4Q9NVX7 518 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 RRP15Q9Y3B9 282 aaKnown RBP14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 GAP43P17677 238 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 ANKS4BQ8N8V4 417 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 WDR11Q9BZH6 1224 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 FHOD1Q9Y613 1164 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 PLEKHG2Q9H7P9 1386 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 TBC1D8O95759 1140 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 CD19P15391 556 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 NMT1P30419 496 aaKnown RBP14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 AP3B2Q13367 1082 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 NT5DC1Q5TFE4 455 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 PDXDC1Q6P996 788 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 GOLPH3Q9H4A6 298 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 DNAJC12Q9UKB3 198 aa14.28□□□□□ -0.12
DNMT3B-203ENST00000348286 MYCNP04198 464 aaPredicted RBP14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 CHRNA5P30532 468 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 NNTQ13423 1086 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 DENND2CQ68D51 928 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 GIMAP7Q8NHV1 300 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 CEP63Q96MT8 703 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 RTFDC1Q9BY42 306 aaPredicted RBP14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 SNX12Q9UMY4 172 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 LTN1O94822 1766 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 HNRNPDLO14979 420 aaKnown RBP14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 NDUFB10O96000 172 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 SLURP2P0DP57 97 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 LMNB1P20700 586 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 TBX2Q13207 712 aaPredicted RBP14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 GRB10Q13322 594 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 DCAF4Q8WV16 495 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 DDX47Q9H0S4 455 aaKnown RBP14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 SAMD15Q9P1V8 674 aa14.27□□□□□ -0.12
DNMT3B-203ENST00000348286 PDS5AQ29RF7 1337 aaKnown RBP14.27□□□□□ -0.13
DNMT3B-203ENST00000348286 BUB1BO60566 1050 aaPredicted RBP14.27□□□□□ -0.13
DNMT3B-203ENST00000348286 GTF2A1P52655 376 aaPredicted RBP14.27□□□□□ -0.13
DNMT3B-203ENST00000348286 DCUN1D2Q6PH85 259 aa14.27□□□□□ -0.13
DNMT3B-203ENST00000348286 CEP83Q9Y592 693 aa14.27□□□□□ -0.13
DNMT3B-203ENST00000348286 IKBKGQ9Y6K9 419 aa14.27□□□□□ -0.13
DNMT3B-203ENST00000348286 FAM237AA0A1B0GTK4 181 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 SLC9A1P19634 815 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 PDCLQ13371 301 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 NSRP1Q9H0G5 558 aaKnown RBP14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 FMN2Q9NZ56 1722 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 RGS16O15492 202 aaPredicted RBP14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 IFNB1P01574 187 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 GCLMP48507 274 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 PEX3P56589 373 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 DHX9Q08211 1270 aaKnown RBP14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 ANKRD42Q8N9B4 389 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 ZNF341Q9BYN7 854 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 STMN4Q9H169 189 aaPredicted RBP14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 LRRIQ4A6NIV6 560 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 MTMR3Q13615 1198 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 NAALADL2Q58DX5 795 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 ZNF746Q6NUN9 644 aaPredicted RBP14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 SLC30A10Q6XR72 485 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 CAPN12Q6ZSI9 719 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 COG1Q8WTW3 980 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 EIF2AK1Q9BQI3 630 aaKnown RBP14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 TMOD4Q9NZQ9 345 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 DAAM1Q9Y4D1 1078 aa14.26□□□□□ -0.13
DNMT3B-203ENST00000348286 FGGP02679 453 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 LIG4P49917 911 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 GLYCTKQ8IVS8 523 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 TAB3Q8N5C8 712 aaPredicted RBP14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 FAM20AQ96MK3 541 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 IWS1Q96ST2 819 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 SEMA6BQ9H3T3 888 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 IFNAR2P48551 515 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 MXI1P50539 228 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 USP11P51784 963 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 ZNF211Q13398 564 aaPredicted RBP14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 TRPC3Q13507 836 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 SNX1Q13596 522 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 OTUD6AQ7L8S5 288 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 NUDT12Q9BQG2 462 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 RNF14Q9UBS8 474 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 ATP2A1O14983 1001 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 UAP1Q16222 522 aaPredicted RBP14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 PPM1EQ8WY54 764 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 ZNF653Q96CK0 615 aa14.25□□□□□ -0.13
DNMT3B-203ENST00000348286 CEP170P1Q96L14 293 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms