RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 FAM26DQ5JW98 314 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 BMP8AQ7Z5Y6 402 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 RPAINQ86UA6 219 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 MCF2L2Q86YR7 1114 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 PNMA1Q8ND90 353 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 GPKOWQ92917 476 aaPredicted RBP eCLIP11.13□□□□□ -0.63
MRPL55-204ENST00000348259 CLP1Q92989 425 aaKnown RBP11.13□□□□□ -0.63
MRPL55-204ENST00000348259 LRRC2Q9BYS8 371 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 BCAS3Q9H6U6 928 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 KIF3AQ9Y496 699 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 MRVI1Q9Y6F6 885 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 NID2Q14112 1375 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 LOXHD1Q8IVV2 1947 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 PLXNA3P51805 1871 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 PLXNA4Q9HCM2 1894 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 GOLGA6L22H0YM25 854 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 TREHO43280 583 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 MBTPS2O43462 519 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 KDM4AO75164 1064 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 TBX10O75333 385 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 GGPS1O95749 300 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 ZSCAN22P10073 491 aaPredicted RBP11.12□□□□□ -0.63
MRPL55-204ENST00000348259 TGFB3P10600 412 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 THPOP40225 353 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 HYAL1Q12794 435 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 ARHGEF16Q5VV41 709 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 DHX37Q8IY37 1157 aaKnown RBP11.12□□□□□ -0.63
MRPL55-204ENST00000348259 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 ENAHQ8N8S7 591 aaPredicted RBP11.12□□□□□ -0.63
MRPL55-204ENST00000348259 PRSS33Q8NF86 280 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 SNX27Q96L92 541 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 PHOX2BQ99453 314 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 ZKSCAN3Q9BRR0 538 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 LMAN2LQ9H0V9 348 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 RNPEPQ9H4A4 650 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 LY9Q9HBG7 655 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 TOMM22Q9NS69 142 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 MAP3K20Q9NYL2 800 aaKnown RBP11.12□□□□□ -0.63
MRPL55-204ENST00000348259 BRPF3Q9ULD4 1205 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 MRPL11Q9Y3B7 192 aaKnown RBP11.12□□□□□ -0.63
MRPL55-204ENST00000348259 ATP6V1DQ9Y5K8 247 aa11.12□□□□□ -0.63
MRPL55-204ENST00000348259 ZFHX2Q9C0A1 2572 aaPredicted RBP11.12□□□□□ -0.63
MRPL55-204ENST00000348259 KLF18A0A0U1RQI7 1052 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 H3BRB1 525 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 GRM6O15303 877 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 LGALS2P05162 132 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 RB1P06400 928 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 SMIM10L2AP0DMW4 78 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 SMIM10L2BP0DMW5 78 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 STK3Q13188 491 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 SEMA3FQ13275 785 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 PGM5Q15124 567 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 SKOR2Q2VWA4 1001 aaPredicted RBP11.11□□□□□ -0.63
MRPL55-204ENST00000348259 CCDC178Q5BJE1 867 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 LARP1BQ659C4 914 aaKnown RBP11.11□□□□□ -0.63
MRPL55-204ENST00000348259 KCNV1Q6PIU1 500 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 APOA5Q6Q788 366 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 NSUN7Q8NE18 718 aaKnown RBP11.11□□□□□ -0.63
MRPL55-204ENST00000348259 SEPT8Q92599 483 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 ZNF689Q96CS4 500 aaPredicted RBP11.11□□□□□ -0.63
MRPL55-204ENST00000348259 MSLNLQ96KJ4 702 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 TUT1Q9H6E5 874 aaKnown RBP11.11□□□□□ -0.63
MRPL55-204ENST00000348259 EHMT1Q9H9B1 1298 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 MTMR6Q9Y217 621 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 FAM50BQ9Y247 325 aa11.11□□□□□ -0.63
MRPL55-204ENST00000348259 ERICH2A1L162 156 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 C17orf102A2RUQ5 167 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 IFIT3O14879 490 aaKnown RBP11.1□□□□□ -0.63
MRPL55-204ENST00000348259 NCK2O43639 380 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 EYA4O95677 639 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 ICAM3P32942 547 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 BMPR1AP36894 532 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 MGAT3Q09327 533 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 SMAD4Q13485 552 aaKnown RBP11.1□□□□□ -0.63
MRPL55-204ENST00000348259 CBX2Q14781 532 aaPredicted RBP11.1□□□□□ -0.63
MRPL55-204ENST00000348259 SEC23AQ15436 765 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 STAG2Q8N3U4 1231 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 SAMD3Q8N6K7 520 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 APBB2Q92870 758 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 ATP6V0A1Q93050 837 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 SPATA33Q96N06 139 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 INPP4AQ96PE3 977 aaPredicted RBP11.1□□□□□ -0.63
MRPL55-204ENST00000348259 UIMC1Q96RL1 719 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 YME1L1Q96TA2 773 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 CLDND1Q9NY35 253 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 MUTYHQ9UIF7 546 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 TELO2Q9Y4R8 837 aa11.1□□□□□ -0.63
MRPL55-204ENST00000348259 ADGRA3Q8IWK6 1321 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 FNDC1Q4ZHG4 1894 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-204ENST00000348259 CCDC69A6NI79 296 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 GOLGA8BA8MQT2 603 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 CDKL5O76039 1030 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 F13A1P00488 732 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 CFBP00751 764 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 CHRNA1P02708 482 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 MMP1P03956 469 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 GTF2F1P35269 517 aaKnown RBP eCLIP11.09□□□□□ -0.63
MRPL55-204ENST00000348259 MRPS9P82933 396 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms