RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TPM3P06753 285 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 FAM26FQ5R3K3 315 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 GUF1Q8N442 669 aaKnown RBP20.75■□□□□ 0.91
PTN-201ENST00000348225 XPO4Q9C0E2 1151 aaKnown RBP20.75■□□□□ 0.91
PTN-201ENST00000348225 SAMSN1Q9NSI8 373 aaKnown RBP20.75■□□□□ 0.91
PTN-201ENST00000348225 NPHP3-ACAD11A0A0J9YXS1 232 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 ARHGEF35A5YM69 484 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 DKC1O60832 514 aaKnown RBP eCLIP20.75■□□□□ 0.91
PTN-201ENST00000348225 TBCAO75347 108 aaKnown RBP20.75■□□□□ 0.91
PTN-201ENST00000348225 KIF20AO95235 890 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 CCNE2O96020 404 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 CCNE1P24864 410 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 UBASH3AP57075 661 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 PSMC5P62195 406 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 SPAG1Q07617 926 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 GIT2Q14161 759 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 HERC4Q5GLZ8 1057 aaPredicted RBP20.75■□□□□ 0.91
PTN-201ENST00000348225 CDKAL1Q5VV42 579 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 RGMBQ6NW40 437 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 SPC24Q8NBT2 197 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 P2RX5Q93086 422 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 HPS3Q969F9 1004 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 REEP2Q9BRK0 252 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 PORCNQ9H237 461 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 EFCC1Q9HA90 598 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 ZCCHC17Q9NP64 241 aaKnown RBP20.75■□□□□ 0.91
PTN-201ENST00000348225 WRAP73Q9P2S5 460 aaPredicted RBP20.75■□□□□ 0.91
PTN-201ENST00000348225 SLC9A2Q9UBY0 812 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 PCDHA10Q9Y5I2 948 aa20.75■□□□□ 0.91
PTN-201ENST00000348225 PASKQ96RG2 1323 aa20.74■□□□□ 0.91
PTN-201ENST00000348225 PGK2P07205 417 aa20.74■□□□□ 0.91
PTN-201ENST00000348225 RINT1Q6NUQ1 792 aa20.74■□□□□ 0.91
PTN-201ENST00000348225 SAPCD2Q86UD0 394 aa20.74■□□□□ 0.91
PTN-201ENST00000348225 NOC3LQ8WTT2 800 aaKnown RBP20.74■□□□□ 0.91
PTN-201ENST00000348225 TRIM47Q96LD4 638 aa20.74■□□□□ 0.91
PTN-201ENST00000348225 PTPN18Q99952 460 aa20.74■□□□□ 0.91
PTN-201ENST00000348225 RUSC1Q9BVN2 902 aa20.74■□□□□ 0.91
PTN-201ENST00000348225 R3HDMLQ9H3Y0 253 aa20.74■□□□□ 0.91
PTN-201ENST00000348225 ZHX3Q9H4I2 956 aa20.74■□□□□ 0.91
PTN-201ENST00000348225 GPBP1L1Q9HC44 474 aaPredicted RBP20.74■□□□□ 0.91
PTN-201ENST00000348225 DBR1Q9UK59 544 aaKnown RBP20.74■□□□□ 0.91
PTN-201ENST00000348225 PLXNB2O15031 1838 aa20.74■□□□□ 0.91
PTN-201ENST00000348225 ZNFX1Q9P2E3 1918 aaKnown RBP20.73■□□□□ 0.91
PTN-201ENST00000348225 PSAPP07602 524 aa20.73■□□□□ 0.91
PTN-201ENST00000348225 GAP43P17677 238 aa20.73■□□□□ 0.91
PTN-201ENST00000348225 CACNB1Q02641 598 aaPredicted RBP20.73■□□□□ 0.91
PTN-201ENST00000348225 RAD51AP2Q09MP3 1159 aa20.73■□□□□ 0.91
PTN-201ENST00000348225 SEPT14Q6ZU15 432 aa20.73■□□□□ 0.91
PTN-201ENST00000348225 C4orf19Q8IY42 314 aa20.73■□□□□ 0.91
PTN-201ENST00000348225 MYOCDQ8IZQ8 938 aa20.73■□□□□ 0.91
PTN-201ENST00000348225 ABRAQ8N0Z2 381 aa20.73■□□□□ 0.91
PTN-201ENST00000348225 ANKRD20A12PQ8NF67 263 aa20.73■□□□□ 0.91
PTN-201ENST00000348225 CCDC43Q96MW1 224 aaKnown RBP20.73■□□□□ 0.91
PTN-201ENST00000348225 CTAGE1Q96RT6 745 aa20.73■□□□□ 0.91
PTN-201ENST00000348225 COL4A3BPQ9Y5P4 624 aa20.73■□□□□ 0.91
PTN-201ENST00000348225 FSTL1Q12841 308 aa20.72■□□□□ 0.91
PTN-201ENST00000348225 FAM110CQ1W6H9 321 aa20.72■□□□□ 0.91
PTN-201ENST00000348225 HSP90AA4PQ58FG1 418 aa20.72■□□□□ 0.91
PTN-201ENST00000348225 TTI2Q6NXR4 508 aa20.72■□□□□ 0.91
PTN-201ENST00000348225 KCNV1Q6PIU1 500 aa20.72■□□□□ 0.91
PTN-201ENST00000348225 C1orf186Q6ZWK4 172 aa20.72■□□□□ 0.91
PTN-201ENST00000348225 ATP6V0A1Q93050 837 aa20.72■□□□□ 0.91
PTN-201ENST00000348225 IVNS1ABPQ9Y6Y0 642 aa20.72■□□□□ 0.91
PTN-201ENST00000348225 TRIM49BA6NDI0 452 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 ASB14A6NK59 587 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 STRNO43815 780 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 TGFB3P10600 412 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 MIS18BP1Q6P0N0 1132 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 FGD4Q96M96 766 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 THAP9Q9H5L6 903 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 ODF2LQ9ULJ1 636 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 DOCK5Q9H7D0 1870 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 FAM13AO94988 1023 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 SLC10A3P09131 477 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 GUCY2CP25092 1073 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 YWHABP31946 246 aaKnown RBP20.71■□□□□ 0.91
PTN-201ENST00000348225 ACTR2P61160 394 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 NEDD9Q14511 834 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 CENPPQ6IPU0 288 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 FOXR2Q6PJQ5 311 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 SMC1BQ8NDV3 1235 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 MORC4Q8TE76 937 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 TSG101Q99816 390 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 PCDHA2Q9Y5H9 948 aa20.71■□□□□ 0.91
PTN-201ENST00000348225 ZBTB39O15060 712 aa20.7■□□□□ 0.9
PTN-201ENST00000348225 COBLO75128 1261 aa20.7■□□□□ 0.9
PTN-201ENST00000348225 PMS1P54277 932 aaKnown RBP20.7■□□□□ 0.9
PTN-201ENST00000348225 LRRC63Q05C16 580 aa20.7■□□□□ 0.9
PTN-201ENST00000348225 UGCGQ16739 394 aa20.7■□□□□ 0.9
PTN-201ENST00000348225 FILIP1LQ4L180 1135 aa20.7■□□□□ 0.9
PTN-201ENST00000348225 FAM114A1Q8IWE2 563 aa20.7■□□□□ 0.9
PTN-201ENST00000348225 CSGALNACT2Q8N6G5 542 aa20.7■□□□□ 0.9
PTN-201ENST00000348225 ANKEF1Q9NU02 776 aa20.7■□□□□ 0.9
PTN-201ENST00000348225 MAGEC2Q9UBF1 373 aaPredicted RBP20.7■□□□□ 0.9
PTN-201ENST00000348225 SEL1LQ9UBV2 794 aa20.7■□□□□ 0.9
PTN-201ENST00000348225 TLL2Q9Y6L7 1015 aa20.7■□□□□ 0.9
PTN-201ENST00000348225 PLXNA1Q9UIW2 1896 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 FGFR1OPO95684 399 aaKnown RBP20.69■□□□□ 0.9
PTN-201ENST00000348225 UBA1P22314 1058 aaKnown RBP20.69■□□□□ 0.9
PTN-201ENST00000348225 MAPK4P31152 587 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms