RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 PLS1Q14651 629 aa17.66■□□□□ 0.42
MBD1-204ENST00000347968 EPS8L3Q8TE67 593 aaKnown RBP17.66■□□□□ 0.42
MBD1-204ENST00000347968 TLCD1Q96CP7 247 aa17.66■□□□□ 0.42
MBD1-204ENST00000347968 NUDCD1Q96RS6 583 aa17.66■□□□□ 0.42
MBD1-204ENST00000347968 YIPF2Q9BWQ6 316 aa17.66■□□□□ 0.42
MBD1-204ENST00000347968 PHACTR1Q9C0D0 580 aa17.66■□□□□ 0.42
MBD1-204ENST00000347968 ARHGEF3Q9NR81 526 aa17.66■□□□□ 0.42
MBD1-204ENST00000347968 ANKIB1Q9P2G1 1089 aa17.66■□□□□ 0.42
MBD1-204ENST00000347968 V9GY48 417 aaPredicted RBP17.66■□□□□ 0.42
MBD1-204ENST00000347968 SIPA1L3O60292 1781 aaPredicted RBP17.65■□□□□ 0.42
MBD1-204ENST00000347968 PCDH11XQ9BZA7 1347 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 PCDH11YQ9BZA8 1340 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 NPHP3-ACAD11A0A0J9YXS1 232 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 TULP1O00294 542 aaPredicted RBP17.65■□□□□ 0.42
MBD1-204ENST00000347968 SNRPA1P09661 255 aaKnown RBP17.65■□□□□ 0.42
MBD1-204ENST00000347968 SPATA31D3P0C874 917 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 KIAA0753Q2KHM9 967 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 MUM1Q2TAK8 710 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 SPATA31D4Q6ZUB0 917 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 TEX9Q8N6V9 391 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 ATL2Q8NHH9 583 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 PBKQ96KB5 322 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 TANGO6Q9C0B7 1094 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 ZNF330Q9Y3S2 320 aaPredicted RBP17.65■□□□□ 0.42
MBD1-204ENST00000347968 SCN11AQ9UI33 1791 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 A0A0G2JS52 829 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 KRIT1O00522 736 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 CREB3O43889 395 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 ABCD1P33897 745 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 PEX5P50542 639 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 BNIP1Q12981 228 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 TMEM87BQ96K49 555 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 NDNQ99608 321 aa17.65■□□□□ 0.42
MBD1-204ENST00000347968 CNOT10Q9H9A5 744 aaKnown RBP17.65■□□□□ 0.42
MBD1-204ENST00000347968 USP15Q9Y4E8 981 aaPredicted RBP17.65■□□□□ 0.42
MBD1-204ENST00000347968 C5P01031 1676 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 GRID2IPA4D2P6 1211 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 GNAZP19086 355 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 ATP6V1C1P21283 382 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 KRT2P35908 639 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 PTDSS1P48651 473 aaKnown RBP17.64■□□□□ 0.41
MBD1-204ENST00000347968 RCN2Q14257 317 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 CCDC57Q2TAC2 916 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 RABL6Q3YEC7 729 aaPredicted RBP17.64■□□□□ 0.41
MBD1-204ENST00000347968 TSPYL2Q9H2G4 693 aaPredicted RBP17.64■□□□□ 0.41
MBD1-204ENST00000347968 RMND1Q9NWS8 449 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 RGS16O15492 202 aaPredicted RBP17.64■□□□□ 0.41
MBD1-204ENST00000347968 PEX11AO75192 247 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 MYBP10242 640 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 STK4Q13043 487 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 FERMT2Q96AC1 680 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 ADAMTS1Q9UHI8 967 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 NR2E1Q9Y466 385 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 ECM29Q5VYK3 1845 aa17.64■□□□□ 0.41
MBD1-204ENST00000347968 IMPDH2P12268 514 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 CUL1Q13616 776 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 GALNT17Q6IS24 598 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 ZFAND2BQ8WV99 257 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 DNAJC9Q8WXX5 260 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 MOV10L1Q9BXT6 1211 aaKnown RBP17.63■□□□□ 0.41
MBD1-204ENST00000347968 TBC1D2BQ9UPU7 963 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 KAT6BQ8WYB5 2073 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 VEGFAP15692 232 aaPredicted RBP17.63■□□□□ 0.41
MBD1-204ENST00000347968 TARSP26639 723 aaKnown RBP17.63■□□□□ 0.41
MBD1-204ENST00000347968 WTAPQ15007 396 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 RPS6KA1Q15418 735 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 MEI1Q5TIA1 1274 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 OR52E8Q6IFG1 317 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 ZNF449Q6P9G9 518 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 RNF10Q8N5U6 811 aaKnown RBP17.63■□□□□ 0.41
MBD1-204ENST00000347968 MARCH10Q8NA82 808 aaPredicted RBP17.63■□□□□ 0.41
MBD1-204ENST00000347968 RNPEPL1Q9HAU8 725 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 LRRC42Q9Y546 428 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 GOLGA6L10A0A0M3HER8 536 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 PLEKHA8P1O95397 391 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 TPBGLP0DKB5 382 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 GBP1P32455 592 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 SEPT2Q15019 361 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 LRRC15Q8TF66 581 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 CEP126Q9P2H0 1117 aa17.63■□□□□ 0.41
MBD1-204ENST00000347968 NOC2LQ9Y3T9 749 aaKnown RBP17.63■□□□□ 0.41
MBD1-204ENST00000347968 UBTFL6P0CB48 400 aaPredicted RBP17.62■□□□□ 0.41
MBD1-204ENST00000347968 ZCCHC18P0CG32 403 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 CALB2P22676 271 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 DEUP1Q05D60 604 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 GALNTL6Q49A17 601 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 BICDL1Q6ZP65 573 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 ZC3H18Q86VM9 953 aaKnown RBP17.62■□□□□ 0.41
MBD1-204ENST00000347968 IFT74Q96LB3 600 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 PRKAB2O43741 272 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 GSTT1P30711 240 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 CCNFP41002 786 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 PLTPP55058 493 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 FOXO4P98177 505 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 MTMR3Q13615 1198 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 SLC29A2Q14542 456 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 DBN1Q16643 649 aa17.62■□□□□ 0.41
MBD1-204ENST00000347968 ACBD5Q5T8D3 534 aaPredicted RBP17.62■□□□□ 0.41
MBD1-204ENST00000347968 RASGRP4Q8TDF6 673 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms