RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CCSER1Q9C0I3 900 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 AGPAT5Q9NUQ2 364 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 KLHL14Q9P2G3 628 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 NWD1Q149M9 1564 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 CCDC188H7C350 402 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 ZNF18P17022 549 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 CASP7P55210 303 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 ALKBH5Q6P6C2 394 aaKnown RBP16.02■□□□□ 0.16
NUP50-201ENST00000347635 INTS5Q6P9B9 1019 aaKnown RBP16.02■□□□□ 0.16
NUP50-201ENST00000347635 KCTD1Q719H9 257 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 CEP63Q96MT8 703 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 PLTPP55058 493 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 EIF3BP55884 814 aaKnown RBP16.02■□□□□ 0.16
NUP50-201ENST00000347635 E2F4Q16254 413 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 SMC6Q96SB8 1091 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 PDS5AQ29RF7 1337 aaKnown RBP16.02■□□□□ 0.15
NUP50-201ENST00000347635 MON2Q7Z3U7 1717 aa16.02■□□□□ 0.15
NUP50-201ENST00000347635 K7ENM7 598 aa16.02■□□□□ 0.15
NUP50-201ENST00000347635 CTNND1O60716 968 aaKnown RBP16.02■□□□□ 0.15
NUP50-201ENST00000347635 SLC16A2P36021 539 aa16.02■□□□□ 0.15
NUP50-201ENST00000347635 FAM83BQ5T0W9 1011 aa16.02■□□□□ 0.15
NUP50-201ENST00000347635 HHATQ5VTY9 493 aa16.02■□□□□ 0.15
NUP50-201ENST00000347635 APOBEC3FQ8IUX4 373 aaKnown RBP16.02■□□□□ 0.15
NUP50-201ENST00000347635 LMNTD2Q8IXW0 634 aa16.02■□□□□ 0.15
NUP50-201ENST00000347635 GUF1Q8N442 669 aaKnown RBP16.02■□□□□ 0.15
NUP50-201ENST00000347635 ESYT3A0FGR9 886 aa16.02■□□□□ 0.15
NUP50-201ENST00000347635 PCK1P35558 622 aa16.02■□□□□ 0.15
NUP50-201ENST00000347635 NTRK3Q16288 839 aa16.02■□□□□ 0.15
NUP50-201ENST00000347635 PDXDC1Q6P996 788 aa16.02■□□□□ 0.15
NUP50-201ENST00000347635 MAGOHBQ96A72 148 aaKnown RBP16.02■□□□□ 0.15
NUP50-201ENST00000347635 SPC25Q9HBM1 224 aa16.02■□□□□ 0.15
NUP50-201ENST00000347635 PNMA6FA0A0J9YX94 578 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 KDM6AO15550 1401 aaPredicted RBP16.01■□□□□ 0.15
NUP50-201ENST00000347635 CLTAP09496 248 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 SLC15A2Q16348 729 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 DCAF4Q8WV16 495 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 TRIM9Q9C026 710 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 CLIC2O15247 247 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 COASYQ13057 564 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 TBX2Q13207 712 aaPredicted RBP16.01■□□□□ 0.15
NUP50-201ENST00000347635 COL9A3Q14050 684 aaPredicted RBP16.01■□□□□ 0.15
NUP50-201ENST00000347635 UAP1Q16222 522 aaPredicted RBP16.01■□□□□ 0.15
NUP50-201ENST00000347635 MIER3Q7Z3K6 550 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 CCDC63Q8NA47 563 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 FMO2Q99518 471 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 CPVLQ9H3G5 476 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 ZNF446Q9NWS9 450 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 AGTPBP1Q9UPW5 1226 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 USTQ9Y2C2 406 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 H0YCG3 227 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 KRT15P19012 456 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 DR1Q01658 176 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 STAG2Q8N3U4 1231 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 TBC1D16Q8TBP0 767 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 STMN2Q93045 179 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.01■□□□□ 0.15
NUP50-201ENST00000347635 MEIS1O00470 390 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 ADCY8P40145 1251 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 SLC10A5Q5PT55 438 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 STRIP1Q5VSL9 837 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 ANKRD35Q8N283 1001 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 PPFIBP2Q8ND30 876 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 JPH2Q9BR39 696 aaPredicted RBP16.01■□□□□ 0.15
NUP50-201ENST00000347635 PTPN22Q9Y2R2 807 aa16.01■□□□□ 0.15
NUP50-201ENST00000347635 STAT2P52630 851 aa16■□□□□ 0.15
NUP50-201ENST00000347635 CCDC13Q8IYE1 715 aa16■□□□□ 0.15
NUP50-201ENST00000347635 RAB3IPQ96QF0 476 aaPredicted RBP16■□□□□ 0.15
NUP50-201ENST00000347635 CNTNAP5Q8WYK1 1306 aa16■□□□□ 0.15
NUP50-201ENST00000347635 THAP12O43422 761 aa16■□□□□ 0.15
NUP50-201ENST00000347635 NEK9Q8TD19 979 aa16■□□□□ 0.15
NUP50-201ENST00000347635 TEKT3Q9BXF9 490 aa16■□□□□ 0.15
NUP50-201ENST00000347635 TYW1Q9NV66 732 aaKnown RBP16■□□□□ 0.15
NUP50-201ENST00000347635 IFNAR2P48551 515 aa16■□□□□ 0.15
NUP50-201ENST00000347635 PDE6CP51160 858 aa16■□□□□ 0.15
NUP50-201ENST00000347635 AOC3Q16853 763 aa16■□□□□ 0.15
NUP50-201ENST00000347635 GIMAP8Q8ND71 665 aaPredicted RBP16■□□□□ 0.15
NUP50-201ENST00000347635 PAGR1Q9BTK6 254 aa16■□□□□ 0.15
NUP50-201ENST00000347635 MESDQ14696 234 aa16■□□□□ 0.15
NUP50-201ENST00000347635 SYDE2Q5VT97 1194 aa16■□□□□ 0.15
NUP50-201ENST00000347635 WDR93Q6P2C0 686 aa16■□□□□ 0.15
NUP50-201ENST00000347635 TBC1D31Q96DN5 1066 aa16■□□□□ 0.15
NUP50-201ENST00000347635 FAM212AQ96EL1 285 aa16■□□□□ 0.15
NUP50-201ENST00000347635 ATP6V1G3Q96LB4 118 aa16■□□□□ 0.15
NUP50-201ENST00000347635 DLG5Q8TDM6 1919 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 USP17L5A8MUK1 530 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 NT5DC1Q5TFE4 455 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 CDKAL1Q5VV42 579 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 RIN2Q8WYP3 895 aaPredicted RBP15.99■□□□□ 0.15
NUP50-201ENST00000347635 GPR101Q96P66 508 aaPredicted RBP15.99■□□□□ 0.15
NUP50-201ENST00000347635 ANKZF1Q9H8Y5 726 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 TMEM260Q9NX78 707 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 ODR4Q5SWX8 454 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 TRAPPC11Q7Z392 1133 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 EDEM3Q9BZQ6 932 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 A0A1W2PQJ5 194 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 H3BQF6 201 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 ZNF131P52739 623 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 KCTD2Q14681 263 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 C7orf25Q9BPX7 421 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 FERMT1Q9BQL6 677 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms