RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 EPB41L5Q9HCM4 733 aa24.88■■□□□ 1.57
NPAS3-201ENST00000346562 YWHAHQ04917 246 aaPredicted RBP24.87■■□□□ 1.57
NPAS3-201ENST00000346562 GOLGA8FQ08AF8 430 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 GOLGA8DPQ0D2H9 430 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 CATSPER4Q7RTX7 472 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 OR6B3Q8NGW1 331 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 MASTLQ96GX5 879 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 NPHP4O75161 1426 aaPredicted RBP24.87■■□□□ 1.57
NPAS3-201ENST00000346562 TMEM247A6NEH6 219 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 MARK3P27448 753 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 TCP11X2Q5H9J9 407 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 SH3GLB2Q9NR46 395 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 ZC3H15Q8WU90 426 aaKnown RBP24.87■■□□□ 1.57
NPAS3-201ENST00000346562 ZNF341Q9BYN7 854 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 TRIM15Q9C019 465 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 KIF23Q02241 960 aaPredicted RBP24.87■■□□□ 1.57
NPAS3-201ENST00000346562 AP3B2Q13367 1082 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 TMEM179Q6ZVK1 233 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 TTLL6Q8N841 843 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 RPAP1Q9BWH6 1393 aaPredicted RBP24.87■■□□□ 1.57
NPAS3-201ENST00000346562 PLEKHG1Q9ULL1 1385 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 IQANK1A0A1B0GTG1 560 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 IFNAR2P48551 515 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 RWDD4Q6NW29 188 aaKnown RBP24.87■■□□□ 1.57
NPAS3-201ENST00000346562 USP17L2Q6R6M4 530 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 CDC26Q8NHZ8 85 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 SLITRK6Q9H5Y7 841 aa24.87■■□□□ 1.57
NPAS3-201ENST00000346562 ABCA5Q8WWZ7 1642 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.86■■□□□ 1.57
NPAS3-201ENST00000346562 K7ERI5 159 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 ENC1O14682 589 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 EIF2AK2P19525 551 aaKnown RBP24.86■■□□□ 1.57
NPAS3-201ENST00000346562 RECQLP46063 649 aaPredicted RBP24.86■■□□□ 1.57
NPAS3-201ENST00000346562 ERICH1Q86X53 443 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 GIPC2Q8TF65 315 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 ATP8A1Q9Y2Q0 1164 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 BNIP3LO60238 219 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 CXorf38Q8TB03 319 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 FTOQ9C0B1 505 aaKnown RBP eCLIP24.86■■□□□ 1.57
NPAS3-201ENST00000346562 ATP6V0A4Q9HBG4 840 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 FBXO40Q9UH90 709 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 CNOT10Q9H9A5 744 aaKnown RBP24.86■■□□□ 1.57
NPAS3-201ENST00000346562 USP17L8P0C7I0 530 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 LTKP29376 864 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 ATG16L1Q676U5 607 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 SCYL3Q8IZE3 742 aa24.86■■□□□ 1.57
NPAS3-201ENST00000346562 ATP6V1E1P36543 226 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 MECOMQ03112 1051 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 TDRD7Q8NHU6 1098 aaKnown RBP24.85■■□□□ 1.57
NPAS3-201ENST00000346562 PROSER3Q2NL68 480 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 NLRP10Q86W26 655 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 SMYD4Q8IYR2 804 aaPredicted RBP24.85■■□□□ 1.57
NPAS3-201ENST00000346562 PRKAB2O43741 272 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 ZNF18P17022 549 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 CCNE1P24864 410 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 CDK8P49336 464 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 ART3Q13508 389 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 HSPH1Q92598 858 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 DYNLL2Q96FJ2 89 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 NLRP1Q9C000 1473 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 MOCS3O95396 460 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 CTTNQ14247 550 aaKnown RBP24.85■■□□□ 1.57
NPAS3-201ENST00000346562 KCTD16Q68DU8 428 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 FASTKD5Q7L8L6 764 aaKnown RBP24.85■■□□□ 1.57
NPAS3-201ENST00000346562 KRT82Q9NSB4 513 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 KDM5DQ9BY66 1539 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 CYP21A2P08686 494 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 PSMA2P25787 234 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 FRA10AC1Q70Z53 315 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 ZBTB18Q99592 522 aa24.85■■□□□ 1.57
NPAS3-201ENST00000346562 FAM49AQ9H0Q0 323 aaPredicted RBP24.85■■□□□ 1.57
NPAS3-201ENST00000346562 NHEJ1Q9H9Q4 299 aaPredicted RBP24.85■■□□□ 1.57
NPAS3-201ENST00000346562 PLCG1P19174 1290 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 PAPOLAP51003 745 aaKnown RBP24.84■■□□□ 1.57
NPAS3-201ENST00000346562 LRRC63Q05C16 580 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 URGCPQ8TCY9 931 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 EEF2KMTQ96G04 330 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 VPS39Q96JC1 886 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 PDE11AQ9HCR9 933 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 BSDC1Q9NW68 430 aaPredicted RBP24.84■■□□□ 1.57
NPAS3-201ENST00000346562 APOEP02649 317 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 ALKBH8Q96BT7 664 aaKnown RBP24.84■■□□□ 1.57
NPAS3-201ENST00000346562 CCDC138Q96M89 665 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 MYO3BQ8WXR4 1341 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 PLS3P13797 630 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 IFNA8P32881 189 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 ZNF667Q5HYK9 610 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 PACSIN2Q9UNF0 486 aaPredicted RBP24.84■■□□□ 1.57
NPAS3-201ENST00000346562 CENPUQ71F23 418 aa24.84■■□□□ 1.57
NPAS3-201ENST00000346562 IPO5O00410 1097 aaKnown RBP24.83■■□□□ 1.57
NPAS3-201ENST00000346562 C2orf54Q08AI8 447 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 TAF1BQ53T94 588 aaPredicted RBP24.83■■□□□ 1.57
NPAS3-201ENST00000346562 TOPORSQ9NS56 1045 aaPredicted RBP24.83■■□□□ 1.57
NPAS3-201ENST00000346562 SERPINI1Q99574 410 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 UBN2Q6ZU65 1347 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 EXOC1LA0A1B0GW35 172 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 HNRNPCL2B2RXH8 293 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 HNRNPCL1O60812 293 aaKnown RBP24.83■■□□□ 1.57
NPAS3-201ENST00000346562 NOP14P78316 857 aaKnown RBP24.83■■□□□ 1.57
NPAS3-201ENST00000346562 TSPY1Q01534 308 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms