RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SPAG1Q07617 926 aa23.86■■□□□ 1.41
TSPAN3-202ENST00000346495 RINT1Q6NUQ1 792 aa23.86■■□□□ 1.41
TSPAN3-202ENST00000346495 NOC3LQ8WTT2 800 aaKnown RBP23.86■■□□□ 1.41
TSPAN3-202ENST00000346495 KCND2Q9NZV8 630 aa23.86■■□□□ 1.41
TSPAN3-202ENST00000346495 LRRC37A2A6NM11 1700 aa23.85■■□□□ 1.41
TSPAN3-202ENST00000346495 COBLO75128 1261 aa23.85■■□□□ 1.41
TSPAN3-202ENST00000346495 HERC4Q5GLZ8 1057 aaPredicted RBP23.85■■□□□ 1.41
TSPAN3-202ENST00000346495 TTI2Q6NXR4 508 aa23.85■■□□□ 1.41
TSPAN3-202ENST00000346495 SMAP1Q8IYB5 467 aaPredicted RBP23.85■■□□□ 1.41
TSPAN3-202ENST00000346495 TRIM47Q96LD4 638 aa23.85■■□□□ 1.41
TSPAN3-202ENST00000346495 CTAGE1Q96RT6 745 aa23.85■■□□□ 1.41
TSPAN3-202ENST00000346495 REEP2Q9BRK0 252 aa23.85■■□□□ 1.41
TSPAN3-202ENST00000346495 DNAJC25-GNG10A0A024R161 153 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 TRIM49BA6NDI0 452 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 CCNE2O96020 404 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 PMS1P54277 932 aaKnown RBP23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 CACNB1Q02641 598 aaPredicted RBP23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 RAD51AP2Q09MP3 1159 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 WDR78Q5VTH9 848 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 ZSCAN30Q86W11 494 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 RUSC1Q9BVN2 902 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 R3HDMLQ9H3Y0 253 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 ZNFX1Q9P2E3 1918 aaKnown RBP23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 TBCAO75347 108 aaKnown RBP23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 KIF20AO95235 890 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 PSMC5P62195 406 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 CENPPQ6IPU0 288 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 C1orf186Q6ZWK4 172 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 MYOCDQ8IZQ8 938 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 ANKRD20A12PQ8NF67 263 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 NAP1L5Q96NT1 182 aaPredicted RBP23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 PARK7Q99497 189 aaKnown RBP23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 ZHX3Q9H4I2 956 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 THAP9Q9H5L6 903 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 JPH1Q9HDC5 661 aaPredicted RBP23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 IMPACTQ9P2X3 320 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 MORF4L1Q9UBU8 362 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 DBR1Q9UK59 544 aaKnown RBP23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 PCDHA2Q9Y5H9 948 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 PCDHA10Q9Y5I2 948 aa23.84■■□□□ 1.41
TSPAN3-202ENST00000346495 LOC102724159A0A0B4J2E5 919 aa23.83■■□□□ 1.41
TSPAN3-202ENST00000346495 ARHGEF35A5YM69 484 aa23.83■■□□□ 1.41
TSPAN3-202ENST00000346495 FSTL1Q12841 308 aa23.83■■□□□ 1.41
TSPAN3-202ENST00000346495 PWP2Q15269 919 aaKnown RBP23.83■■□□□ 1.41
TSPAN3-202ENST00000346495 CCDC186Q7Z3E2 898 aa23.83■■□□□ 1.41
TSPAN3-202ENST00000346495 C4orf19Q8IY42 314 aa23.83■■□□□ 1.41
TSPAN3-202ENST00000346495 FAM43AQ8N2R8 423 aa23.83■■□□□ 1.41
TSPAN3-202ENST00000346495 SLC9A2Q9UBY0 812 aa23.83■■□□□ 1.41
TSPAN3-202ENST00000346495 COL4A3BPQ9Y5P4 624 aa23.83■■□□□ 1.41
TSPAN3-202ENST00000346495 DOCK5Q9H7D0 1870 aa23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 WDR81Q562E7 1941 aa23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 ESPNB1AK53 854 aa23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 ZBTB39O15060 712 aa23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 GAP43P17677 238 aa23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 ANKRD40Q6AI12 368 aa23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 FOXR2Q6PJQ5 311 aa23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 ANKRD13CQ8N6S4 541 aa23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 DUSP9Q99956 384 aaKnown RBP23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 PORCNQ9H237 461 aa23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 LIMA1Q9UHB6 759 aaKnown RBP23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 NRBP1Q9UHY1 535 aa23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 ZKSCAN5Q9Y2L8 839 aa23.82■■□□□ 1.4
TSPAN3-202ENST00000346495 DKC1O60832 514 aaKnown RBP eCLIP23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 PGK2P07205 417 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 FILIP1LQ4L180 1135 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 SEPT14Q6ZU15 432 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 CSGALNACT2Q8N6G5 542 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 SEMA6BQ9H3T3 888 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 EFCC1Q9HA90 598 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 PLXNB2O15031 1838 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 A0A1B0GTH6 734 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 KCNJ18B7U540 433 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 PSAPP07602 524 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 PTGS1P23219 599 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 GUCY2CP25092 1073 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 ZNF157P51786 506 aaPredicted RBP23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 LRRC63Q05C16 580 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 KCNJ12Q14500 433 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 LRRC41Q15345 812 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 TCP11X2Q5H9J9 407 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 APTXQ7Z2E3 356 aaKnown RBP23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 TMC6Q7Z403 805 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 RASAL3Q86YV0 1011 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 FGD4Q96M96 766 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 PTPN18Q99952 460 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 SRRTQ9BXP5 876 aaKnown RBP23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 TBC1D7Q9P0N9 293 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 ODF2LQ9ULJ1 636 aa23.81■■□□□ 1.4
TSPAN3-202ENST00000346495 FAM13AO94988 1023 aa23.8■■□□□ 1.4
TSPAN3-202ENST00000346495 UGCGQ16739 394 aa23.8■■□□□ 1.4
TSPAN3-202ENST00000346495 CCDC144BQ3MJ40 725 aa23.8■■□□□ 1.4
TSPAN3-202ENST00000346495 SFR1Q86XK3 245 aa23.8■■□□□ 1.4
TSPAN3-202ENST00000346495 FAM114A1Q8IWE2 563 aa23.8■■□□□ 1.4
TSPAN3-202ENST00000346495 TSG101Q99816 390 aa23.8■■□□□ 1.4
TSPAN3-202ENST00000346495 ANKEF1Q9NU02 776 aa23.8■■□□□ 1.4
TSPAN3-202ENST00000346495 MAGEC2Q9UBF1 373 aaPredicted RBP23.8■■□□□ 1.4
TSPAN3-202ENST00000346495 MANSC4A6NHS7 340 aaPredicted RBP23.79■■□□□ 1.4
TSPAN3-202ENST00000346495 LRRC10BA6NIK2 292 aa23.79■■□□□ 1.4
TSPAN3-202ENST00000346495 FGFR1OPO95684 399 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms