RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 NIPA1Q7RTP0 329 aa18.27■□□□□ 0.52
RAB5C-201ENST00000346213 CCDC60Q8IWA6 550 aaPredicted RBP18.27■□□□□ 0.52
RAB5C-201ENST00000346213 CCDC148Q8NFR7 591 aa18.27■□□□□ 0.52
RAB5C-201ENST00000346213 TBCKQ8TEA7 893 aa18.27■□□□□ 0.52
RAB5C-201ENST00000346213 INTS4Q96HW7 963 aaKnown RBP18.27■□□□□ 0.52
RAB5C-201ENST00000346213 EHMT1Q9H9B1 1298 aa18.27■□□□□ 0.52
RAB5C-201ENST00000346213 EMSYQ7Z589 1322 aa18.27■□□□□ 0.51
RAB5C-201ENST00000346213 UNC80Q8N2C7 3258 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 IGKV6D-21A0A0A0MT36 114 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 SELPP16109 830 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 DNAJB2P25686 324 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 GNA11P29992 359 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 PRR16Q569H4 304 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 ABHD15Q6UXT9 468 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 SPRED2Q7Z698 418 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 TRIM22Q8IYM9 498 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 BLIDQ8IZY5 108 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 CAGE1Q8TC20 777 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 CCDC12Q8WUD4 166 aaPredicted RBP18.26■□□□□ 0.51
RAB5C-201ENST00000346213 ATP6V0A1Q93050 837 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 GLT8D2Q9H1C3 349 aa18.26■□□□□ 0.51
RAB5C-201ENST00000346213 MSH4O15457 936 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 MAFGO15525 162 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 CXCL10P02778 98 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 FOSBP53539 338 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 MKRN4PQ13434 485 aaPredicted RBP18.25■□□□□ 0.51
RAB5C-201ENST00000346213 GIMAP8Q8ND71 665 aaPredicted RBP18.25■□□□□ 0.51
RAB5C-201ENST00000346213 AFAP1L1Q8TED9 768 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 TNFRSF25Q93038 417 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 GBF1Q92538 1859 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 IPO5O00410 1097 aaKnown RBP18.25■□□□□ 0.51
RAB5C-201ENST00000346213 SLC37A4O43826 429 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 CTSHP09668 335 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 ZNF76P36508 570 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 BFSP2Q13515 415 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 PLCB4Q15147 1175 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 SEMA6BQ9H3T3 888 aa18.25■□□□□ 0.51
RAB5C-201ENST00000346213 ORC3Q9UBD5 711 aaPredicted RBP18.25■□□□□ 0.51
RAB5C-201ENST00000346213 ZBTB42B2RXF5 422 aa18.24■□□□□ 0.51
RAB5C-201ENST00000346213 THPOP40225 353 aa18.24■□□□□ 0.51
RAB5C-201ENST00000346213 NUCB2P80303 420 aa18.24■□□□□ 0.51
RAB5C-201ENST00000346213 DEFB103AP81534 67 aa18.24■□□□□ 0.51
RAB5C-201ENST00000346213 NR5A1Q13285 461 aa18.24■□□□□ 0.51
RAB5C-201ENST00000346213 GRIK4Q16099 956 aa18.24■□□□□ 0.51
RAB5C-201ENST00000346213 ZNF577Q9BSK1 485 aa18.24■□□□□ 0.51
RAB5C-201ENST00000346213 LIMCH1Q9UPQ0 1083 aa18.24■□□□□ 0.51
RAB5C-201ENST00000346213 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.23■□□□□ 0.51
RAB5C-201ENST00000346213 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.23■□□□□ 0.51
RAB5C-201ENST00000346213 MBLAC1A4D2B0 266 aaPredicted RBP18.23■□□□□ 0.51
RAB5C-201ENST00000346213 INSRRP14616 1297 aa18.23■□□□□ 0.51
RAB5C-201ENST00000346213 UGCGQ16739 394 aa18.23■□□□□ 0.51
RAB5C-201ENST00000346213 INF2Q27J81 1249 aa18.23■□□□□ 0.51
RAB5C-201ENST00000346213 MBOAT7Q96N66 472 aa18.23■□□□□ 0.51
RAB5C-201ENST00000346213 SDF4Q9BRK5 362 aa18.23■□□□□ 0.51
RAB5C-201ENST00000346213 IGBP1P78318 339 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 MGAT3Q09327 533 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 PPFIA1Q13136 1202 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 GRIN2CQ14957 1233 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 ANKRD1Q15327 319 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 RETREG2Q8NC44 543 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 BICD2Q8TD16 824 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 GLG1Q92896 1179 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 TNPO1Q92973 898 aaKnown RBP18.22■□□□□ 0.51
RAB5C-201ENST00000346213 ERAP1Q9NZ08 941 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 ZNF215Q9UL58 517 aaPredicted RBP18.22■□□□□ 0.51
RAB5C-201ENST00000346213 ZBBXA8MT70 800 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 CHRNA1P02708 482 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 MCM4P33991 863 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 RFC2P35250 354 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 B3GNT9Q6UX72 402 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 CCDC83Q8IWF9 413 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 ETNPPLQ8TBG4 499 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 SLC5A5Q92911 643 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 ZSCAN31Q96LW9 406 aaPredicted RBP18.22■□□□□ 0.51
RAB5C-201ENST00000346213 NKX2-4Q9H2Z4 354 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 SMARCAD1Q9H4L7 1026 aa18.22■□□□□ 0.51
RAB5C-201ENST00000346213 NRCAMQ92823 1304 aa18.21■□□□□ 0.51
RAB5C-201ENST00000346213 ZNF862O60290 1169 aa18.21■□□□□ 0.51
RAB5C-201ENST00000346213 WDR5P61964 334 aaKnown RBP18.21■□□□□ 0.51
RAB5C-201ENST00000346213 RPUSD2Q8IZ73 545 aaKnown RBP18.21■□□□□ 0.51
RAB5C-201ENST00000346213 CDX2Q99626 313 aaPredicted RBP18.21■□□□□ 0.51
RAB5C-201ENST00000346213 FTOQ9C0B1 505 aaKnown RBP eCLIP18.21■□□□□ 0.51
RAB5C-201ENST00000346213 UNC45AQ9H3U1 944 aa18.21■□□□□ 0.51
RAB5C-201ENST00000346213 TRANK1O15050 2925 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 CYP3A7-CYP3A51PA0A087WV96 503 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 PSMD10O75832 226 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 CYP3A7P24462 503 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 STAT5BP51692 787 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 SETQ01105 290 aaPredicted RBP18.2■□□□□ 0.5
RAB5C-201ENST00000346213 Q4G0T1 1027 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 ZNF697Q5TEC3 545 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 SWSAP1Q6NVH7 229 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 CPLX2Q6PUV4 134 aaKnown RBP18.2■□□□□ 0.5
RAB5C-201ENST00000346213 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.2■□□□□ 0.5
RAB5C-201ENST00000346213 CLEC17AQ6ZS10 378 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 MYLIPQ8WY64 445 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 TIFAQ96CG3 184 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 TUBE1Q9UJT0 475 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 A0A0C4DFX4 3053 aa18.2■□□□□ 0.5
RAB5C-201ENST00000346213 IGSF9BQ9UPX0 1349 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms