RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CEP170P1Q96L14 293 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 PANX2Q96RD6 677 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 MMS19Q96T76 1030 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 TEKT3Q9BXF9 490 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 PACSIN1Q9BY11 444 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 PARP4Q9UKK3 1724 aaKnown RBP14.6□□□□□ -0.07
CASC4-202ENST00000345795 PLEKHG2Q9H7P9 1386 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 ZBED4O75132 1171 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 ZBED6P86452 979 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 ATG4CQ96DT6 458 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 PCDHA13Q9Y5I0 950 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 HOXA10P31260 410 aaPredicted RBP14.59□□□□□ -0.07
CASC4-202ENST00000345795 C8orf74Q6P047 294 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 DEFB129Q9H1M3 183 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 ACP6Q9NPH0 428 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 CTTNBP2NLQ9P2B4 639 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 STK17AQ9UEE5 414 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 COL18A1P39060 1754 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 COPB2P35606 906 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 ATP1A2P50993 1020 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 MAP2K1Q02750 393 aaPredicted RBP14.59□□□□□ -0.07
CASC4-202ENST00000345795 ZNF211Q13398 564 aaPredicted RBP14.59□□□□□ -0.07
CASC4-202ENST00000345795 MTMR1Q13613 665 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 SRGAP1Q7Z6B7 1085 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 C4orf32Q8N8J7 132 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 NOX5Q96PH1 765 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 THAP9Q9H5L6 903 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 RPAP3Q9H6T3 665 aaPredicted RBP14.59□□□□□ -0.07
CASC4-202ENST00000345795 KDM3AQ9Y4C1 1321 aa14.59□□□□□ -0.07
CASC4-202ENST00000345795 SPDYE2BA6NHP3 402 aa14.58□□□□□ -0.07
CASC4-202ENST00000345795 WNT10BO00744 389 aa14.58□□□□□ -0.07
CASC4-202ENST00000345795 HNRNPDLO14979 420 aaKnown RBP14.58□□□□□ -0.07
CASC4-202ENST00000345795 ASNSP08243 561 aa14.58□□□□□ -0.07
CASC4-202ENST00000345795 SPDYE6P0CI01 402 aa14.58□□□□□ -0.07
CASC4-202ENST00000345795 TNFAIP3P21580 790 aa14.58□□□□□ -0.07
CASC4-202ENST00000345795 CETN1Q12798 172 aa14.58□□□□□ -0.07
CASC4-202ENST00000345795 BAATQ14032 418 aaPredicted RBP14.58□□□□□ -0.07
CASC4-202ENST00000345795 TRIM14Q14142 442 aa14.58□□□□□ -0.07
CASC4-202ENST00000345795 TRIM65Q6PJ69 517 aa14.58□□□□□ -0.07
CASC4-202ENST00000345795 KRT12Q99456 494 aa14.58□□□□□ -0.07
CASC4-202ENST00000345795 SH2D4AQ9H788 454 aa14.58□□□□□ -0.07
CASC4-202ENST00000345795 DNAJC17Q9NVM6 304 aaKnown RBP14.58□□□□□ -0.07
CASC4-202ENST00000345795 MYH13Q9UKX3 1938 aa14.58□□□□□ -0.07
CASC4-202ENST00000345795 EFCAB8A8MWE9 144 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 CALUO43852 315 aaPredicted RBP14.58□□□□□ -0.08
CASC4-202ENST00000345795 VSNL1P62760 191 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 LEKR1Q6ZMV7 388 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 IRF2BP1Q8IU81 584 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 PKNOX2Q96KN3 472 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 HAUS4Q9H6D7 363 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 PARVGQ9HBI0 331 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 TMOD4Q9NZQ9 345 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 CAPN6Q9Y6Q1 641 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 NR3C1P04150 777 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 CYP11B2P19099 503 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 GUCY2DQ02846 1103 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 CDKAL1Q5VV42 579 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 POMGNT1Q8WZA1 660 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 OTUD5Q96G74 571 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 RSPH14Q9UHP6 348 aa14.58□□□□□ -0.08
CASC4-202ENST00000345795 RCCD1A6NED2 376 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 N4BP1O75113 896 aaKnown RBP14.57□□□□□ -0.08
CASC4-202ENST00000345795 CSDE1O75534 798 aaKnown RBP14.57□□□□□ -0.08
CASC4-202ENST00000345795 ZBTB33Q86T24 672 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 GLYCTKQ8IVS8 523 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 TAAR1Q96RJ0 339 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 ZNRF3Q9ULT6 936 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 ADCY1Q08828 1119 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 Q3C1V9 767 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 CEP55Q53EZ4 464 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 KIAA1755Q5JYT7 1200 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 RNF207Q6ZRF8 634 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 NAA15Q9BXJ9 866 aaKnown RBP14.57□□□□□ -0.08
CASC4-202ENST00000345795 ACBD3Q9H3P7 528 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 MYOZ2Q9NPC6 264 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 UBE2TQ9NPD8 197 aaPredicted RBP14.57□□□□□ -0.08
CASC4-202ENST00000345795 LIMA1Q9UHB6 759 aaKnown RBP14.57□□□□□ -0.08
CASC4-202ENST00000345795 DDX41Q9UJV9 622 aaKnown RBP14.57□□□□□ -0.08
CASC4-202ENST00000345795 COL4A1P02462 1669 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 ATMINO43313 823 aaPredicted RBP14.57□□□□□ -0.08
CASC4-202ENST00000345795 KLRC4O43908 158 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 PALMO75781 387 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 KRT19P08727 400 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 COG1Q8WTW3 980 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 POP1Q99575 1024 aaKnown RBP14.57□□□□□ -0.08
CASC4-202ENST00000345795 NUP58Q9BVL2 599 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 RNF146Q9NTX7 359 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 GGA3Q9NZ52 723 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 PODXL2Q9NZ53 605 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 FHOD1Q9Y613 1164 aa14.57□□□□□ -0.08
CASC4-202ENST00000345795 DOT1LQ8TEK3 1739 aa14.56□□□□□ -0.08
CASC4-202ENST00000345795 RPS6P62753 249 aaKnown RBP14.56□□□□□ -0.08
CASC4-202ENST00000345795 SWSAP1Q6NVH7 229 aa14.56□□□□□ -0.08
CASC4-202ENST00000345795 PADI6Q6TGC4 694 aa14.56□□□□□ -0.08
CASC4-202ENST00000345795 CAPN12Q6ZSI9 719 aa14.56□□□□□ -0.08
CASC4-202ENST00000345795 PEX26Q7Z412 305 aa14.56□□□□□ -0.08
CASC4-202ENST00000345795 SH3RF1Q7Z6J0 888 aa14.56□□□□□ -0.08
CASC4-202ENST00000345795 PASD1Q8IV76 773 aa14.56□□□□□ -0.08
CASC4-202ENST00000345795 IL31RAQ8NI17 732 aa14.56□□□□□ -0.08
CASC4-202ENST00000345795 TADA3O75528 432 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms