RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 CEP72Q9P209 647 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 MROH5Q6ZUA9 1318 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 POLA2Q14181 598 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 UBE3CQ15386 1083 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 SHC4Q6S5L8 630 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 REXO1L1PQ8IX06 675 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 SLITRK6Q9H5Y7 841 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 USP40Q9NVE5 1235 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 WARS2Q9UGM6 360 aaKnown RBP13.03□□□□□ -0.32
COL12A1-202ENST00000345356 SYNGAP1Q96PV0 1343 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 MCF2LO15068 1137 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 PLXNC1O60486 1568 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 A1BGP04217 495 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 RNF34Q969K3 372 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 ATP10BO94823 1461 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 WDR7Q9Y4E6 1490 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 LRRIQ3A6PVS8 624 aaPredicted RBP13.02□□□□□ -0.32
COL12A1-202ENST00000345356 SUPT3HO75486 399 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 CPP00450 1065 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 GNAT1P11488 350 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 SLC1A4P43007 532 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 TMED10P49755 219 aaKnown RBP13.02□□□□□ -0.32
COL12A1-202ENST00000345356 STX1BP61266 288 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 SLC44A4Q53GD3 710 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 OSBP2Q969R2 916 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 MS4A14Q96JA4 679 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 AMACRQ9UHK6 382 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 PNMA2Q9UL42 364 aa13.02□□□□□ -0.32
COL12A1-202ENST00000345356 A0A1B0GTH6 734 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 UBTFL6P0CB48 400 aaPredicted RBP13.02□□□□□ -0.33
COL12A1-202ENST00000345356 PGM1P36871 562 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 RNF207Q6ZRF8 634 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 RFX6Q8HWS3 928 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 WDR75Q8IWA0 830 aaKnown RBP13.02□□□□□ -0.33
COL12A1-202ENST00000345356 EHD2Q9NZN4 543 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 BAG5Q9UL15 447 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 L1RE1Q9UN81 338 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 DLATP10515 647 aaKnown RBP13.02□□□□□ -0.33
COL12A1-202ENST00000345356 PSMD7P51665 324 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 MED21Q13503 144 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 KRT26Q7Z3Y9 468 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 HIC2Q96JB3 615 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 STK17AQ9UEE5 414 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 CDHR2Q9BYE9 1310 aa13.02□□□□□ -0.33
COL12A1-202ENST00000345356 KRT1P04264 644 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 KRT19P08727 400 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 PDHBP11177 359 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 ECE1P42892 770 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 PTK2Q05397 1052 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 CYLC2Q14093 348 aaPredicted RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 MAPKAPK5Q8IW41 473 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 SLFN12Q8IYM2 578 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 KIAA2013Q8IYS2 634 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 PROCA1Q8NCQ7 364 aaPredicted RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 SPC25Q9HBM1 224 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 SATB2Q9UPW6 733 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 IPO5O00410 1097 aaKnown RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 NOP56O00567 594 aaKnown RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 GNGT2O14610 69 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 CLIC2O15247 247 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 TOM1O60784 492 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 ADORA1P30542 326 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 ZNF211Q13398 564 aaPredicted RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 METTL16Q86W50 562 aaKnown RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 MYCBPAPQ8TBZ2 947 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 UPF3AQ9H1J1 476 aaKnown RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 APOBEC2Q9Y235 224 aaKnown RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 AGTP01019 485 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 ACTN1P12814 892 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 RHOT2Q8IXI1 618 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 PSTPIP2Q9H939 334 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 CAPN11Q9UMQ6 739 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 TRPC6Q9Y210 931 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 GAS7O60861 476 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 KITP10721 976 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 PAPOLAP51003 745 aaKnown RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 DYNLT1P63172 113 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 RAPH1Q70E73 1250 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 STAG2Q8N3U4 1231 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 HDAC11Q96DB2 347 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 TRIM11Q96F44 468 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 COPEO14579 308 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 AGBL2Q5U5Z8 902 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 DCLK2Q8N568 766 aa13.01□□□□□ -0.33
COL12A1-202ENST00000345356 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 ZNF496Q96IT1 587 aaPredicted RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 PAPOLBQ9NRJ5 636 aaKnown RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 PPP1R1BQ9UD71 204 aaPredicted RBP13.01□□□□□ -0.33
COL12A1-202ENST00000345356 FXR1P51114 621 aaKnown RBP eCLIP13□□□□□ -0.33
COL12A1-202ENST00000345356 CYP4A11Q02928 519 aa13□□□□□ -0.33
COL12A1-202ENST00000345356 PABPC4Q13310 644 aaKnown RBP eCLIP13□□□□□ -0.33
COL12A1-202ENST00000345356 FOXR1Q6PIV2 292 aa13□□□□□ -0.33
COL12A1-202ENST00000345356 VTI1AQ96AJ9 217 aa13□□□□□ -0.33
COL12A1-202ENST00000345356 CFAP36Q96G28 342 aa13□□□□□ -0.33
COL12A1-202ENST00000345356 MPHOSPH6Q99547 160 aaKnown RBP13□□□□□ -0.33
COL12A1-202ENST00000345356 CARD10Q9BWT7 1032 aa13□□□□□ -0.33
COL12A1-202ENST00000345356 TRPV6Q9H1D0 765 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms