RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 FAM160B1Q5W0V3 765 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 RDM1Q8NG50 284 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 ETNPPLQ8TBG4 499 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 DIS3LQ8TF46 1054 aaKnown RBP13.35□□□□□ -0.27
SNCA-202ENST00000345009 RAB34Q9BZG1 259 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 TUT1Q9H6E5 874 aaKnown RBP13.35□□□□□ -0.27
SNCA-202ENST00000345009 KCNMB3Q9NPA1 279 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 PCDHA12Q9UN75 941 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 MTMR6Q9Y217 621 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 PCDHA10Q9Y5I2 948 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 LRRC37A2A6NM11 1700 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 SLC37A4O43826 429 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 PSMD10O75832 226 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 PTGS1P23219 599 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 CHMP4BP1P59074 171 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 ITGA7Q13683 1181 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 ARSIQ5FYB1 569 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 UTP14CQ5TAP6 766 aaKnown RBP13.34□□□□□ -0.27
SNCA-202ENST00000345009 C1orf53Q5VUE5 145 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 NFRKBQ6P4R8 1299 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 SLC39A5Q6ZMH5 540 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 FERMT3Q86UX7 667 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 C7orf31Q8N865 590 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 DPF3Q92784 378 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 UIMC1Q96RL1 719 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 BCAS3Q9H6U6 928 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 DISC1Q9NRI5 854 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 ERAP1Q9NZ08 941 aa13.34□□□□□ -0.27
SNCA-202ENST00000345009 MKI67P46013 3256 aaKnown RBP13.33□□□□□ -0.27
SNCA-202ENST00000345009 GSTTP1A0A1W2PQM5 241 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 DCDC2CA8MYV0 355 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 ARVCFO00192 962 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 TLR3O15455 904 aaKnown RBP13.33□□□□□ -0.28
SNCA-202ENST00000345009 DKC1O60832 514 aaKnown RBP eCLIP13.33□□□□□ -0.28
SNCA-202ENST00000345009 ATG7O95352 703 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 F2P00734 622 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 LGALS2P05162 132 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 OR52Z1P0C646 297 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
SNCA-202ENST00000345009 GNAT1P11488 350 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.28
SNCA-202ENST00000345009 TXKP42681 527 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 STAT5BP51692 787 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 PTPN11Q06124 597 aaPredicted RBP13.33□□□□□ -0.28
SNCA-202ENST00000345009 PLPPR4Q7Z2D5 763 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 MIER3Q7Z3K6 550 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 TOX2Q96NM4 488 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 TTC12Q9H892 705 aaPredicted RBP13.33□□□□□ -0.28
SNCA-202ENST00000345009 ATP6V1DQ9Y5K8 247 aa13.33□□□□□ -0.28
SNCA-202ENST00000345009 CHMP2AO43633 222 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 EVI5O60447 810 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 CCNE2O96020 404 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 SUPT20HL2P0C7V6 817 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 ZNF286BP0CG31 522 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 PSEN2P49810 448 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 TOB1P50616 345 aaPredicted RBP13.32□□□□□ -0.28
SNCA-202ENST00000345009 MLLT1Q03111 559 aaPredicted RBP13.32□□□□□ -0.28
SNCA-202ENST00000345009 PTGDRQ13258 359 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 PPP2R5CQ13362 524 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 MFSD10Q14728 455 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 KIAA0753Q2KHM9 967 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 NBPF20Q3BBV1 942 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 FAM47CQ5HY64 1035 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 PPP1R15BQ5SWA1 713 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 SWSAP1Q6NVH7 229 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 ABHD15Q6UXT9 468 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 CKAP2LQ8IYA6 745 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 ERMNQ8TAM6 284 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 HAS1Q92839 578 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 ATP6V0A1Q93050 837 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 ZNF396Q96N95 335 aaPredicted RBP13.32□□□□□ -0.28
SNCA-202ENST00000345009 MTMR9Q96QG7 549 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 C16orf70Q9BSU1 422 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 ZNF302Q9NR11 478 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 PRKAG2Q9UGJ0 569 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 NOD1Q9Y239 953 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 PCDHB6Q9Y5E3 794 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 NR2E3Q9Y5X4 410 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 EMSYQ7Z589 1322 aa13.32□□□□□ -0.28
SNCA-202ENST00000345009 LGR5O75473 907 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 PRPHP41219 470 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 NUCB2P80303 420 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 RESTQ13127 1097 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 PDIA5Q14554 519 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 SNX17Q15036 470 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 ARL6IP4Q66PJ3 421 aaKnown RBP13.31□□□□□ -0.28
SNCA-202ENST00000345009 ATL3Q6DD88 541 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 PDXDC2PQ6P474 469 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 DTHD1Q6ZMT9 781 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 AFAP1L1Q8TED9 768 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 KAT2BQ92831 832 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 UNC45AQ9H3U1 944 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.31□□□□□ -0.28
SNCA-202ENST00000345009 NRBP2Q9NSY0 501 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 ATP11BQ9Y2G3 1177 aa13.31□□□□□ -0.28
SNCA-202ENST00000345009 IGKV6D-21A0A0A0MT36 114 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 HAS3O00219 553 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 PQBP1O60828 265 aaKnown RBP13.3□□□□□ -0.28
SNCA-202ENST00000345009 F13A1P00488 732 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms